Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
CTSDP07339 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CTSDP07339 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC17.92■□□□□ 0.46
CTSDP07339 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CTSDP07339 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CTSDP07339 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
CTSDP07339 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC17.92■□□□□ 0.46
CTSDP07339 AL033527.3-201ENST00000566366 1196 ntBASIC17.92■□□□□ 0.46
CTSDP07339 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC17.92■□□□□ 0.46
CTSDP07339 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CTSDP07339 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC17.92■□□□□ 0.46
CTSDP07339 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
CTSDP07339 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC17.92■□□□□ 0.46
CTSDP07339 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
CTSDP07339 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CTSDP07339 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC17.92■□□□□ 0.46
CTSDP07339 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CTSDP07339 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CTSDP07339 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CTSDP07339 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
CTSDP07339 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC17.91■□□□□ 0.46
CTSDP07339 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CTSDP07339 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CTSDP07339 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC17.91■□□□□ 0.46
CTSDP07339 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
CTSDP07339 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CTSDP07339 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CTSDP07339 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
CTSDP07339 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CTSDP07339 BEX3-202ENST00000372634 753 ntTSL 2 BASIC17.91■□□□□ 0.46
CTSDP07339 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CTSDP07339 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CTSDP07339 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC17.91■□□□□ 0.46
CTSDP07339 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CTSDP07339 MIR6722-201ENST00000617286 78 ntBASIC17.91■□□□□ 0.46
CTSDP07339 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CTSDP07339 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CTSDP07339 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CTSDP07339 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CTSDP07339 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CTSDP07339 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CTSDP07339 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CTSDP07339 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CTSDP07339 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CTSDP07339 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CTSDP07339 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC17.91■□□□□ 0.46
CTSDP07339 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
CTSDP07339 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CTSDP07339 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
CTSDP07339 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CTSDP07339 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC17.9■□□□□ 0.46
CTSDP07339 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CTSDP07339 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC17.9■□□□□ 0.46
CTSDP07339 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC17.9■□□□□ 0.46
CTSDP07339 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CTSDP07339 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC17.9■□□□□ 0.46
CTSDP07339 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
CTSDP07339 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CTSDP07339 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
CTSDP07339 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC17.9■□□□□ 0.46
CTSDP07339 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC17.9■□□□□ 0.46
CTSDP07339 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
CTSDP07339 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
CTSDP07339 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CTSDP07339 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CTSDP07339 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CTSDP07339 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CTSDP07339 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CTSDP07339 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CTSDP07339 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CTSDP07339 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
CTSDP07339 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CTSDP07339 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC17.88■□□□□ 0.45
CTSDP07339 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC17.88■□□□□ 0.45
CTSDP07339 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CTSDP07339 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC17.88■□□□□ 0.45
CTSDP07339 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CTSDP07339 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CTSDP07339 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CTSDP07339 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC17.88■□□□□ 0.45
CTSDP07339 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CTSDP07339 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CTSDP07339 GUK1-208ENST00000366728 842 ntTSL 2 BASIC17.88■□□□□ 0.45
CTSDP07339 SENP5-202ENST00000419026 973 ntTSL 3 BASIC17.88■□□□□ 0.45
CTSDP07339 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CTSDP07339 AC010980.1-201ENST00000587192 1142 ntBASIC17.88■□□□□ 0.45
CTSDP07339 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CTSDP07339 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CTSDP07339 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC17.88■□□□□ 0.45
CTSDP07339 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
CTSDP07339 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CTSDP07339 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
CTSDP07339 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CTSDP07339 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CTSDP07339 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CTSDP07339 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CTSDP07339 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CTSDP07339 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC17.87■□□□□ 0.45
CTSDP07339 AL157384.1-201ENST00000445995 2473 ntBASIC17.87■□□□□ 0.45
CTSDP07339 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 130.1 ms