Protein–RNA interactions for Protein: P0CX71

TY1A-ER1, Transposon Ty1-ER1 Gag polyprotein, yeastyeast

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-ER1P0CX71 COX16YJL003W 357 nt8.57□□□□□ -1.04
TY1A-ER1P0CX71 YOL037CYOL037C 354 nt8.57□□□□□ -1.04
TY1A-ER1P0CX71 FEN2YCR028C 1539 nt8.57□□□□□ -1.04
TY1A-ER1P0CX71 FRD1YEL047C 1413 nt8.56□□□□□ -1.04
TY1A-ER1P0CX71 YJL211CYJL211C 444 nt8.56□□□□□ -1.04
TY1A-ER1P0CX71 YNL165WYNL165W 1221 nt8.56□□□□□ -1.04
TY1A-ER1P0CX71 PUS7YOR243C 2031 nt8.56□□□□□ -1.04
TY1A-ER1P0CX71 RTN2YDL204W 1182 nt8.55□□□□□ -1.04
TY1A-ER1P0CX71 YDR509WYDR509W 348 nt8.55□□□□□ -1.04
TY1A-ER1P0CX71 AQY2YLL052C 450 nt8.55□□□□□ -1.04
TY1A-ER1P0CX71 PET20YPL159C 762 nt8.55□□□□□ -1.04
TY1A-ER1P0CX71 TPO4YOR273C 1980 nt8.55□□□□□ -1.04
TY1A-ER1P0CX71 EEB1YPL095C 1371 nt8.54□□□□□ -1.04
TY1A-ER1P0CX71 Q0144Q0144 330 nt8.54□□□□□ -1.04
TY1A-ER1P0CX71 YIR016WYIR016W 798 nt8.54□□□□□ -1.04
TY1A-ER1P0CX71 DIC1YLR348C 897 nt8.53□□□□□ -1.04
TY1A-ER1P0CX71 THP3YPR045C 1413 nt8.53□□□□□ -1.04
TY1A-ER1P0CX71 snR78snR78 87 nt8.52□□□□□ -1.05
TY1A-ER1P0CX71 YDR524C-BYDR524C-B 201 nt8.52□□□□□ -1.05
TY1A-ER1P0CX71 YKL097CYKL097C 411 nt8.52□□□□□ -1.05
TY1A-ER1P0CX71 YNR068CYNR068C 819 nt8.52□□□□□ -1.05
TY1A-ER1P0CX71 APM1YPL259C 1428 nt8.52□□□□□ -1.05
TY1A-ER1P0CX71 UGA4YDL210W 1716 nt8.5□□□□□ -1.05
TY1A-ER1P0CX71 FMP45YDL222C 930 nt8.5□□□□□ -1.05
TY1A-ER1P0CX71 YDR433WYDR433W 441 nt8.5□□□□□ -1.05
TY1A-ER1P0CX71 SPC25YER018C 666 nt8.5□□□□□ -1.05
TY1A-ER1P0CX71 YGR201CYGR201C 678 nt8.5□□□□□ -1.05
TY1A-ER1P0CX71 YNL115CYNL115C 1935 nt8.5□□□□□ -1.05
TY1A-ER1P0CX71 MCM5YLR274W 2328 nt8.49□□□□□ -1.05
TY1A-ER1P0CX71 YDR306CYDR306C 1437 nt8.49□□□□□ -1.05
TY1A-ER1P0CX71 ALD4YOR374W 1560 nt8.48□□□□□ -1.05
TY1A-ER1P0CX71 PRM5YIL117C 957 nt8.47□□□□□ -1.05
TY1A-ER1P0CX71 YMR147WYMR147W 672 nt8.47□□□□□ -1.05
TY1A-ER1P0CX71 YGL118CYGL118C 438 nt8.46□□□□□ -1.06
TY1A-ER1P0CX71 YMR209CYMR209C 1374 nt8.46□□□□□ -1.06
TY1A-ER1P0CX71 SCO2YBR024W 906 nt8.45□□□□□ -1.06
TY1A-ER1P0CX71 ATG22YCL038C 1587 nt8.44□□□□□ -1.06
TY1A-ER1P0CX71 AQY1YPR192W 918 nt8.44□□□□□ -1.06
TY1A-ER1P0CX71 PLB1YMR008C 1995 nt8.43□□□□□ -1.06
TY1A-ER1P0CX71 VPS60YDR486C 690 nt8.43□□□□□ -1.06
TY1A-ER1P0CX71 PIC2YER053C 903 nt8.43□□□□□ -1.06
TY1A-ER1P0CX71 YBL081WYBL081W 1107 nt8.43□□□□□ -1.06
TY1A-ER1P0CX71 ALG3YBL082C 1377 nt8.43□□□□□ -1.06
TY1A-ER1P0CX71 YCR099CYCR099C 468 nt8.42□□□□□ -1.06
TY1A-ER1P0CX71 IDP3YNL009W 1263 nt8.42□□□□□ -1.06
TY1A-ER1P0CX71 ICE2YIL090W 1476 nt8.4□□□□□ -1.06
TY1A-ER1P0CX71 YPR011CYPR011C 981 nt8.4□□□□□ -1.06
TY1A-ER1P0CX71 NAT5YOR253W 531 nt8.39□□□□□ -1.07
TY1A-ER1P0CX71 PZF1YPR186C 1290 nt8.39□□□□□ -1.07
TY1A-ER1P0CX71 URE2YNL229C 1065 nt8.38□□□□□ -1.07
TY1A-ER1P0CX71 YOR325WYOR325W 474 nt8.38□□□□□ -1.07
TY1A-ER1P0CX71 AVT6YER119C 1347 nt8.37□□□□□ -1.07
TY1A-ER1P0CX71 YJL067WYJL067W 351 nt8.37□□□□□ -1.07
TY1A-ER1P0CX71 UGP1YKL035W 1500 nt8.37□□□□□ -1.07
TY1A-ER1P0CX71 URA8YJR103W 1737 nt8.37□□□□□ -1.07
TY1A-ER1P0CX71 YHL008CYHL008C 1884 nt8.36□□□□□ -1.07
TY1A-ER1P0CX71 YEL074WYEL074W 339 nt8.36□□□□□ -1.07
TY1A-ER1P0CX71 YNL024CYNL024C 741 nt8.36□□□□□ -1.07
TY1A-ER1P0CX71 GOR1YNL274C 1053 nt8.36□□□□□ -1.07
TY1A-ER1P0CX71 ZRT3YKL175W 1512 nt8.35□□□□□ -1.07
TY1A-ER1P0CX71 CCT4YDL143W 1587 nt8.35□□□□□ -1.07
TY1A-ER1P0CX71 ILV3YJR016C 1758 nt8.34□□□□□ -1.07
TY1A-ER1P0CX71 YKR040CYKR040C 504 nt8.33□□□□□ -1.08
TY1A-ER1P0CX71 MOD5YOR274W 1287 nt8.33□□□□□ -1.08
TY1A-ER1P0CX71 YSP3YOR003W 1437 nt8.32□□□□□ -1.08
TY1A-ER1P0CX71 YHP1YDR451C 1062 nt8.32□□□□□ -1.08
TY1A-ER1P0CX71 ARP6YLR085C 1317 nt8.31□□□□□ -1.08
TY1A-ER1P0CX71 ERV46YAL042W 1248 nt8.31□□□□□ -1.08
TY1A-ER1P0CX71 SIR2YDL042C 1689 nt8.3□□□□□ -1.08
TY1A-ER1P0CX71 AIM41YOR215C 558 nt8.29□□□□□ -1.08
TY1A-ER1P0CX71 COQ8YGL119W 1506 nt8.29□□□□□ -1.08
TY1A-ER1P0CX71 GET2YER083C 858 nt8.27□□□□□ -1.09
TY1A-ER1P0CX71 BNA3YJL060W 1335 nt8.27□□□□□ -1.09
TY1A-ER1P0CX71 UTR1YJR049C 1593 nt8.27□□□□□ -1.09
TY1A-ER1P0CX71 HIS2YFR025C 1008 nt8.26□□□□□ -1.09
TY1A-ER1P0CX71 MRS3YJL133W 945 nt8.26□□□□□ -1.09
TY1A-ER1P0CX71 NBP35YGL091C 987 nt8.24□□□□□ -1.09
TY1A-ER1P0CX71 LSM12YHR121W 564 nt8.24□□□□□ -1.09
TY1A-ER1P0CX71 YNL234WYNL234W 1281 nt8.24□□□□□ -1.09
TY1A-ER1P0CX71 ARO8YGL202W 1503 nt8.24□□□□□ -1.09
TY1A-ER1P0CX71 SSN3YPL042C 1668 nt8.22□□□□□ -1.09
TY1A-ER1P0CX71 AHT1YHR093W 549 nt8.22□□□□□ -1.09
TY1A-ER1P0CX71 YLR179CYLR179C 606 nt8.22□□□□□ -1.09
TY1A-ER1P0CX71 SWC5YBR231C 912 nt8.22□□□□□ -1.09
TY1A-ER1P0CX71 PSD1YNL169C 1503 nt8.22□□□□□ -1.09
TY1A-ER1P0CX71 GAT1YFL021W 1533 nt8.21□□□□□ -1.1
TY1A-ER1P0CX71 YCR049CYCR049C 447 nt8.21□□□□□ -1.1
TY1A-ER1P0CX71 RRP1YDR087C 837 nt8.21□□□□□ -1.1
TY1A-ER1P0CX71 YMR306C-AYMR306C-A 390 nt8.21□□□□□ -1.1
TY1A-ER1P0CX71 TIM23YNR017W 669 nt8.21□□□□□ -1.1
TY1A-ER1P0CX71 YOR139CYOR139C 393 nt8.21□□□□□ -1.1
TY1A-ER1P0CX71 GID7YCL039W 2238 nt8.2□□□□□ -1.1
TY1A-ER1P0CX71 MPC1YGL080W 393 nt8.2□□□□□ -1.1
TY1A-ER1P0CX71 ZAP1YJL056C 2643 nt8.2□□□□□ -1.1
TY1A-ER1P0CX71 SGA1YIL099W 1650 nt8.19□□□□□ -1.1
TY1A-ER1P0CX71 COA2YPL189C-A 207 nt8.19□□□□□ -1.1
TY1A-ER1P0CX71 ALG7YBR243C 1347 nt8.19□□□□□ -1.1
TY1A-ER1P0CX71 CWC25YNL245C 540 nt8.18□□□□□ -1.1
TY1A-ER1P0CX71 RSC8YFR037C 1674 nt8.18□□□□□ -1.1
TY1A-ER1P0CX71 CBK1YNL161W 2271 nt8.17□□□□□ -1.1
Retrieved 100 of 7,029 protein–RNA pairs in 13.3 ms