Protein–RNA interactions for Protein: Q9Y5I0

PCDHA13, Protocadherin alpha-13, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13Q9Y5I0 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
PCDHA13Q9Y5I0 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
PCDHA13Q9Y5I0 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
PCDHA13Q9Y5I0 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
PCDHA13Q9Y5I0 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PCDHA13Q9Y5I0 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PCDHA13Q9Y5I0 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PCDHA13Q9Y5I0 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
PCDHA13Q9Y5I0 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC23.16■■□□□ 1.3
PCDHA13Q9Y5I0 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC23.16■■□□□ 1.3
PCDHA13Q9Y5I0 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PCDHA13Q9Y5I0 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
PCDHA13Q9Y5I0 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PCDHA13Q9Y5I0 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
PCDHA13Q9Y5I0 TUB-203ENST00000534099 1759 ntTSL 2 BASIC23.16■■□□□ 1.3
PCDHA13Q9Y5I0 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
PCDHA13Q9Y5I0 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
PCDHA13Q9Y5I0 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PCDHA13Q9Y5I0 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PCDHA13Q9Y5I0 PKD1P6-201ENST00000343738 4769 ntBASIC23.16■■□□□ 1.3
PCDHA13Q9Y5I0 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
PCDHA13Q9Y5I0 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC23.16■■□□□ 1.3
PCDHA13Q9Y5I0 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PCDHA13Q9Y5I0 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
PCDHA13Q9Y5I0 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
PCDHA13Q9Y5I0 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC23.15■■□□□ 1.3
PCDHA13Q9Y5I0 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC23.14■■□□□ 1.3
PCDHA13Q9Y5I0 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
PCDHA13Q9Y5I0 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
PCDHA13Q9Y5I0 Z98882.1-201ENST00000622160 2253 ntBASIC23.14■■□□□ 1.29
PCDHA13Q9Y5I0 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC23.14■■□□□ 1.29
PCDHA13Q9Y5I0 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC23.14■■□□□ 1.29
PCDHA13Q9Y5I0 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
PCDHA13Q9Y5I0 LSM4-201ENST00000252816 986 ntTSL 2 BASIC23.14■■□□□ 1.29
PCDHA13Q9Y5I0 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.29
PCDHA13Q9Y5I0 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC23.14■■□□□ 1.29
PCDHA13Q9Y5I0 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
PCDHA13Q9Y5I0 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
PCDHA13Q9Y5I0 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC23.14■■□□□ 1.29
PCDHA13Q9Y5I0 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.29
PCDHA13Q9Y5I0 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
PCDHA13Q9Y5I0 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC23.14■■□□□ 1.29
PCDHA13Q9Y5I0 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC23.14■■□□□ 1.29
PCDHA13Q9Y5I0 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
PCDHA13Q9Y5I0 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
PCDHA13Q9Y5I0 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
PCDHA13Q9Y5I0 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PCDHA13Q9Y5I0 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC23.13■■□□□ 1.29
PCDHA13Q9Y5I0 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
PCDHA13Q9Y5I0 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
PCDHA13Q9Y5I0 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PCDHA13Q9Y5I0 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC23.13■■□□□ 1.29
PCDHA13Q9Y5I0 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PCDHA13Q9Y5I0 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC23.12■■□□□ 1.29
PCDHA13Q9Y5I0 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC23.12■■□□□ 1.29
PCDHA13Q9Y5I0 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PCDHA13Q9Y5I0 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
PCDHA13Q9Y5I0 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PCDHA13Q9Y5I0 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC23.12■■□□□ 1.29
PCDHA13Q9Y5I0 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
PCDHA13Q9Y5I0 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
PCDHA13Q9Y5I0 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
PCDHA13Q9Y5I0 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PCDHA13Q9Y5I0 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
PCDHA13Q9Y5I0 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
PCDHA13Q9Y5I0 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
PCDHA13Q9Y5I0 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
PCDHA13Q9Y5I0 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
PCDHA13Q9Y5I0 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
PCDHA13Q9Y5I0 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC23.11■■□□□ 1.29
PCDHA13Q9Y5I0 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC23.11■■□□□ 1.29
PCDHA13Q9Y5I0 AC239859.2-201ENST00000444165 318 ntBASIC23.11■■□□□ 1.29
PCDHA13Q9Y5I0 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
PCDHA13Q9Y5I0 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC23.11■■□□□ 1.29
PCDHA13Q9Y5I0 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
PCDHA13Q9Y5I0 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
PCDHA13Q9Y5I0 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
PCDHA13Q9Y5I0 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
PCDHA13Q9Y5I0 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC23.11■■□□□ 1.29
PCDHA13Q9Y5I0 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PCDHA13Q9Y5I0 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC23.1■■□□□ 1.29
PCDHA13Q9Y5I0 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
PCDHA13Q9Y5I0 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
PCDHA13Q9Y5I0 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC23.1■■□□□ 1.29
PCDHA13Q9Y5I0 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
PCDHA13Q9Y5I0 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
PCDHA13Q9Y5I0 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PCDHA13Q9Y5I0 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC23.1■■□□□ 1.29
PCDHA13Q9Y5I0 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
PCDHA13Q9Y5I0 TSPY9P-201ENST00000440215 945 ntBASIC23.1■■□□□ 1.29
PCDHA13Q9Y5I0 TSPY11P-201ENST00000442607 1045 ntBASIC23.1■■□□□ 1.29
PCDHA13Q9Y5I0 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
PCDHA13Q9Y5I0 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC23.1■■□□□ 1.29
PCDHA13Q9Y5I0 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
PCDHA13Q9Y5I0 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC23.1■■□□□ 1.29
PCDHA13Q9Y5I0 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
PCDHA13Q9Y5I0 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PCDHA13Q9Y5I0 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
PCDHA13Q9Y5I0 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PCDHA13Q9Y5I0 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms