Protein–RNA interactions for Protein: Q9Y2U8

LEMD3, Inner nuclear membrane protein Man1, humanhuman

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3Q9Y2U8 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
LEMD3Q9Y2U8 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC26.55■■□□□ 1.84
LEMD3Q9Y2U8 MAP2K4P1-201ENST00000438453 1195 ntBASIC26.55■■□□□ 1.84
LEMD3Q9Y2U8 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC26.55■■□□□ 1.84
LEMD3Q9Y2U8 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
LEMD3Q9Y2U8 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC26.54■■□□□ 1.84
LEMD3Q9Y2U8 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
LEMD3Q9Y2U8 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
LEMD3Q9Y2U8 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC26.54■■□□□ 1.84
LEMD3Q9Y2U8 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
LEMD3Q9Y2U8 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
LEMD3Q9Y2U8 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC26.54■■□□□ 1.84
LEMD3Q9Y2U8 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC26.54■■□□□ 1.84
LEMD3Q9Y2U8 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
LEMD3Q9Y2U8 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
LEMD3Q9Y2U8 LINC01960-201ENST00000563759 1884 ntBASIC26.53■■□□□ 1.84
LEMD3Q9Y2U8 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC26.53■■□□□ 1.84
LEMD3Q9Y2U8 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
LEMD3Q9Y2U8 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC26.53■■□□□ 1.84
LEMD3Q9Y2U8 MDK-213ENST00000617138 635 ntTSL 2 BASIC26.53■■□□□ 1.84
LEMD3Q9Y2U8 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
LEMD3Q9Y2U8 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
LEMD3Q9Y2U8 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
LEMD3Q9Y2U8 PXK-203ENST00000383715 1756 ntTSL 5 BASIC26.53■■□□□ 1.84
LEMD3Q9Y2U8 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
LEMD3Q9Y2U8 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC26.52■■□□□ 1.84
LEMD3Q9Y2U8 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC26.52■■□□□ 1.84
LEMD3Q9Y2U8 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC26.52■■□□□ 1.84
LEMD3Q9Y2U8 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
LEMD3Q9Y2U8 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC26.52■■□□□ 1.84
LEMD3Q9Y2U8 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
LEMD3Q9Y2U8 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC26.51■■□□□ 1.83
LEMD3Q9Y2U8 AC055733.4-201ENST00000638462 1354 ntBASIC26.51■■□□□ 1.83
LEMD3Q9Y2U8 AC006970.2-201ENST00000450065 779 ntBASIC26.51■■□□□ 1.83
LEMD3Q9Y2U8 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC26.51■■□□□ 1.83
LEMD3Q9Y2U8 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC26.51■■□□□ 1.83
LEMD3Q9Y2U8 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC26.51■■□□□ 1.83
LEMD3Q9Y2U8 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC26.51■■□□□ 1.83
LEMD3Q9Y2U8 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC26.51■■□□□ 1.83
LEMD3Q9Y2U8 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
LEMD3Q9Y2U8 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC26.51■■□□□ 1.83
LEMD3Q9Y2U8 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
LEMD3Q9Y2U8 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC26.5■■□□□ 1.83
LEMD3Q9Y2U8 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC26.5■■□□□ 1.83
LEMD3Q9Y2U8 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC26.5■■□□□ 1.83
LEMD3Q9Y2U8 MFSD11-216ENST00000590393 1141 ntBASIC26.5■■□□□ 1.83
LEMD3Q9Y2U8 AC104771.1-201ENST00000603335 964 ntBASIC26.5■■□□□ 1.83
LEMD3Q9Y2U8 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
LEMD3Q9Y2U8 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC26.5■■□□□ 1.83
LEMD3Q9Y2U8 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
LEMD3Q9Y2U8 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
LEMD3Q9Y2U8 MFF-207ENST00000409565 1548 ntTSL 2 BASIC26.49■■□□□ 1.83
LEMD3Q9Y2U8 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC26.49■■□□□ 1.83
LEMD3Q9Y2U8 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
LEMD3Q9Y2U8 NCF1B-203ENST00000435988 1254 ntBASIC26.49■■□□□ 1.83
LEMD3Q9Y2U8 EMC9-206ENST00000560403 872 ntTSL 2 BASIC26.49■■□□□ 1.83
LEMD3Q9Y2U8 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC26.49■■□□□ 1.83
LEMD3Q9Y2U8 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC26.49■■□□□ 1.83
LEMD3Q9Y2U8 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC26.49■■□□□ 1.83
LEMD3Q9Y2U8 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC26.49■■□□□ 1.83
LEMD3Q9Y2U8 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
LEMD3Q9Y2U8 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC26.48■■□□□ 1.83
LEMD3Q9Y2U8 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
LEMD3Q9Y2U8 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
LEMD3Q9Y2U8 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
LEMD3Q9Y2U8 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
LEMD3Q9Y2U8 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC26.48■■□□□ 1.83
LEMD3Q9Y2U8 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC26.48■■□□□ 1.83
LEMD3Q9Y2U8 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC26.48■■□□□ 1.83
LEMD3Q9Y2U8 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
LEMD3Q9Y2U8 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC26.47■■□□□ 1.83
LEMD3Q9Y2U8 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC26.47■■□□□ 1.83
LEMD3Q9Y2U8 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
LEMD3Q9Y2U8 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC26.47■■□□□ 1.83
LEMD3Q9Y2U8 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC26.47■■□□□ 1.83
LEMD3Q9Y2U8 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC26.47■■□□□ 1.83
LEMD3Q9Y2U8 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC26.47■■□□□ 1.83
LEMD3Q9Y2U8 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC26.47■■□□□ 1.83
LEMD3Q9Y2U8 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC26.46■■□□□ 1.83
LEMD3Q9Y2U8 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
LEMD3Q9Y2U8 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
LEMD3Q9Y2U8 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
LEMD3Q9Y2U8 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC26.46■■□□□ 1.83
LEMD3Q9Y2U8 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC26.46■■□□□ 1.83
LEMD3Q9Y2U8 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
LEMD3Q9Y2U8 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC26.46■■□□□ 1.83
LEMD3Q9Y2U8 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC26.46■■□□□ 1.83
LEMD3Q9Y2U8 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC26.46■■□□□ 1.83
LEMD3Q9Y2U8 DUSP8P5-201ENST00000422884 1815 ntBASIC26.46■■□□□ 1.83
LEMD3Q9Y2U8 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
LEMD3Q9Y2U8 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
LEMD3Q9Y2U8 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC26.45■■□□□ 1.82
LEMD3Q9Y2U8 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC26.45■■□□□ 1.82
LEMD3Q9Y2U8 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC26.45■■□□□ 1.82
LEMD3Q9Y2U8 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC26.45■■□□□ 1.82
LEMD3Q9Y2U8 AL109923.1-201ENST00000618799 583 ntBASIC26.45■■□□□ 1.82
LEMD3Q9Y2U8 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC26.44■■□□□ 1.82
LEMD3Q9Y2U8 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC26.44■■□□□ 1.82
LEMD3Q9Y2U8 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
LEMD3Q9Y2U8 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC26.44■■□□□ 1.82
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms