Protein–RNA interactions for Protein: Q9H9S0

NANOG, Homeobox protein NANOG, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NANOGQ9H9S0 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20.54■□□□□ 0.88
NANOGQ9H9S0 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
NANOGQ9H9S0 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NANOGQ9H9S0 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
NANOGQ9H9S0 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NANOGQ9H9S0 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NANOGQ9H9S0 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NANOGQ9H9S0 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
NANOGQ9H9S0 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC20.54■□□□□ 0.88
NANOGQ9H9S0 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC20.54■□□□□ 0.88
NANOGQ9H9S0 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
NANOGQ9H9S0 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NANOGQ9H9S0 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NANOGQ9H9S0 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
NANOGQ9H9S0 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NANOGQ9H9S0 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
NANOGQ9H9S0 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NANOGQ9H9S0 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NANOGQ9H9S0 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC20.53■□□□□ 0.88
NANOGQ9H9S0 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NANOGQ9H9S0 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NANOGQ9H9S0 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC20.53■□□□□ 0.88
NANOGQ9H9S0 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC20.53■□□□□ 0.88
NANOGQ9H9S0 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NANOGQ9H9S0 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NANOGQ9H9S0 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NANOGQ9H9S0 AC073130.3-201ENST00000624389 2278 ntBASIC20.53■□□□□ 0.88
NANOGQ9H9S0 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NANOGQ9H9S0 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
NANOGQ9H9S0 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NANOGQ9H9S0 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
NANOGQ9H9S0 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
NANOGQ9H9S0 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
NANOGQ9H9S0 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
NANOGQ9H9S0 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
NANOGQ9H9S0 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
NANOGQ9H9S0 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.52■□□□□ 0.88
NANOGQ9H9S0 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
NANOGQ9H9S0 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
NANOGQ9H9S0 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
NANOGQ9H9S0 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.87
NANOGQ9H9S0 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NANOGQ9H9S0 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.51■□□□□ 0.87
NANOGQ9H9S0 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NANOGQ9H9S0 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
NANOGQ9H9S0 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NANOGQ9H9S0 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
NANOGQ9H9S0 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC20.51■□□□□ 0.87
NANOGQ9H9S0 BX664725.1-201ENST00000438252 379 ntBASIC20.51■□□□□ 0.87
NANOGQ9H9S0 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC20.51■□□□□ 0.87
NANOGQ9H9S0 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC20.51■□□□□ 0.87
NANOGQ9H9S0 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.51■□□□□ 0.87
NANOGQ9H9S0 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NANOGQ9H9S0 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
NANOGQ9H9S0 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
NANOGQ9H9S0 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
NANOGQ9H9S0 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NANOGQ9H9S0 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC20.51■□□□□ 0.87
NANOGQ9H9S0 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
NANOGQ9H9S0 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
NANOGQ9H9S0 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
NANOGQ9H9S0 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
NANOGQ9H9S0 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.5■□□□□ 0.87
NANOGQ9H9S0 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
NANOGQ9H9S0 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC20.5■□□□□ 0.87
NANOGQ9H9S0 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NANOGQ9H9S0 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.5■□□□□ 0.87
NANOGQ9H9S0 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
NANOGQ9H9S0 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NANOGQ9H9S0 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
NANOGQ9H9S0 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NANOGQ9H9S0 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.5■□□□□ 0.87
NANOGQ9H9S0 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NANOGQ9H9S0 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.5■□□□□ 0.87
NANOGQ9H9S0 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
NANOGQ9H9S0 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NANOGQ9H9S0 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC20.5■□□□□ 0.87
NANOGQ9H9S0 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NANOGQ9H9S0 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.49■□□□□ 0.87
NANOGQ9H9S0 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.49■□□□□ 0.87
NANOGQ9H9S0 C17orf82-201ENST00000623772 1530 ntBASIC20.49■□□□□ 0.87
NANOGQ9H9S0 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NANOGQ9H9S0 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
NANOGQ9H9S0 FEM1AP4-201ENST00000443167 1987 ntBASIC20.49■□□□□ 0.87
NANOGQ9H9S0 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
NANOGQ9H9S0 AF106564.1-201ENST00000607058 2553 ntBASIC20.49■□□□□ 0.87
NANOGQ9H9S0 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
NANOGQ9H9S0 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
NANOGQ9H9S0 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
NANOGQ9H9S0 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.49■□□□□ 0.87
NANOGQ9H9S0 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.49■□□□□ 0.87
NANOGQ9H9S0 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
NANOGQ9H9S0 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC20.48■□□□□ 0.87
NANOGQ9H9S0 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NANOGQ9H9S0 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NANOGQ9H9S0 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.48■□□□□ 0.87
NANOGQ9H9S0 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
NANOGQ9H9S0 AC092028.1-203ENST00000608262 953 ntBASIC20.48■□□□□ 0.87
NANOGQ9H9S0 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NANOGQ9H9S0 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms