Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 RP9P-202ENST00000450133 1212 ntBASIC20.61■□□□□ 0.89
VCX3BQ9H321 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC20.61■□□□□ 0.89
VCX3BQ9H321 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
VCX3BQ9H321 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
VCX3BQ9H321 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
VCX3BQ9H321 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
VCX3BQ9H321 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.61■□□□□ 0.89
VCX3BQ9H321 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
VCX3BQ9H321 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
VCX3BQ9H321 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.61■□□□□ 0.89
VCX3BQ9H321 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
VCX3BQ9H321 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
VCX3BQ9H321 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
VCX3BQ9H321 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
VCX3BQ9H321 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC20.6■□□□□ 0.89
VCX3BQ9H321 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
VCX3BQ9H321 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
VCX3BQ9H321 FEM1AP4-201ENST00000443167 1987 ntBASIC20.6■□□□□ 0.89
VCX3BQ9H321 MOB2-207ENST00000614710 705 ntTSL 5 BASIC20.6■□□□□ 0.89
VCX3BQ9H321 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
VCX3BQ9H321 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
VCX3BQ9H321 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
VCX3BQ9H321 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.6■□□□□ 0.89
VCX3BQ9H321 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
VCX3BQ9H321 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
VCX3BQ9H321 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC20.59■□□□□ 0.89
VCX3BQ9H321 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
VCX3BQ9H321 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
VCX3BQ9H321 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
VCX3BQ9H321 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
VCX3BQ9H321 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.59■□□□□ 0.89
VCX3BQ9H321 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
VCX3BQ9H321 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
VCX3BQ9H321 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
VCX3BQ9H321 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC20.59■□□□□ 0.89
VCX3BQ9H321 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC20.59■□□□□ 0.89
VCX3BQ9H321 NRG1-221ENST00000614767 762 ntTSL 5 BASIC20.59■□□□□ 0.89
VCX3BQ9H321 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
VCX3BQ9H321 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.59■□□□□ 0.89
VCX3BQ9H321 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
VCX3BQ9H321 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.58■□□□□ 0.89
VCX3BQ9H321 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
VCX3BQ9H321 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.89
VCX3BQ9H321 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.58■□□□□ 0.89
VCX3BQ9H321 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.58■□□□□ 0.89
VCX3BQ9H321 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
VCX3BQ9H321 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
VCX3BQ9H321 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.58■□□□□ 0.89
VCX3BQ9H321 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
VCX3BQ9H321 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
VCX3BQ9H321 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.58■□□□□ 0.89
VCX3BQ9H321 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
VCX3BQ9H321 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
VCX3BQ9H321 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
VCX3BQ9H321 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.58■□□□□ 0.88
VCX3BQ9H321 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
VCX3BQ9H321 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.88
VCX3BQ9H321 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC20.58■□□□□ 0.88
VCX3BQ9H321 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
VCX3BQ9H321 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
VCX3BQ9H321 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.58■□□□□ 0.88
VCX3BQ9H321 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
VCX3BQ9H321 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
VCX3BQ9H321 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
VCX3BQ9H321 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
VCX3BQ9H321 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
VCX3BQ9H321 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
VCX3BQ9H321 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
VCX3BQ9H321 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
VCX3BQ9H321 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
VCX3BQ9H321 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
VCX3BQ9H321 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
VCX3BQ9H321 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
VCX3BQ9H321 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
VCX3BQ9H321 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
VCX3BQ9H321 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
VCX3BQ9H321 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
VCX3BQ9H321 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
VCX3BQ9H321 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
VCX3BQ9H321 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
VCX3BQ9H321 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
VCX3BQ9H321 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
VCX3BQ9H321 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
VCX3BQ9H321 LINC01006-201ENST00000333319 2292 ntBASIC20.56■□□□□ 0.88
VCX3BQ9H321 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
VCX3BQ9H321 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
VCX3BQ9H321 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
VCX3BQ9H321 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
VCX3BQ9H321 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
VCX3BQ9H321 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
VCX3BQ9H321 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.56■□□□□ 0.88
VCX3BQ9H321 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.56■□□□□ 0.88
VCX3BQ9H321 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
VCX3BQ9H321 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.55■□□□□ 0.88
VCX3BQ9H321 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
VCX3BQ9H321 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
VCX3BQ9H321 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
VCX3BQ9H321 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
VCX3BQ9H321 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
VCX3BQ9H321 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms