Protein–RNA interactions for Protein: Q7Z3Y7

KRT28, Keratin, type I cytoskeletal 28, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28Q7Z3Y7 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
KRT28Q7Z3Y7 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC29.75■■■□□ 2.35
KRT28Q7Z3Y7 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC29.75■■■□□ 2.35
KRT28Q7Z3Y7 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC29.75■■■□□ 2.35
KRT28Q7Z3Y7 EED-207ENST00000528180 1745 ntTSL 5 BASIC29.75■■■□□ 2.35
KRT28Q7Z3Y7 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC29.75■■■□□ 2.35
KRT28Q7Z3Y7 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
KRT28Q7Z3Y7 DUSP8P3-201ENST00000399571 1760 ntBASIC29.75■■■□□ 2.35
KRT28Q7Z3Y7 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
KRT28Q7Z3Y7 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
KRT28Q7Z3Y7 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC29.74■■■□□ 2.35
KRT28Q7Z3Y7 ITM2C-210ENST00000620962 501 ntBASIC29.74■■■□□ 2.35
KRT28Q7Z3Y7 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC29.74■■■□□ 2.35
KRT28Q7Z3Y7 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
KRT28Q7Z3Y7 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC29.73■■■□□ 2.35
KRT28Q7Z3Y7 AC010536.3-201ENST00000620306 533 ntBASIC29.73■■■□□ 2.35
KRT28Q7Z3Y7 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
KRT28Q7Z3Y7 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC29.72■■■□□ 2.35
KRT28Q7Z3Y7 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
KRT28Q7Z3Y7 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC29.72■■■□□ 2.35
KRT28Q7Z3Y7 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC29.72■■■□□ 2.35
KRT28Q7Z3Y7 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
KRT28Q7Z3Y7 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC29.72■■■□□ 2.35
KRT28Q7Z3Y7 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC29.71■■■□□ 2.35
KRT28Q7Z3Y7 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
KRT28Q7Z3Y7 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
KRT28Q7Z3Y7 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC29.71■■■□□ 2.35
KRT28Q7Z3Y7 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC29.71■■■□□ 2.35
KRT28Q7Z3Y7 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC29.71■■■□□ 2.35
KRT28Q7Z3Y7 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC29.7■■■□□ 2.35
KRT28Q7Z3Y7 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC29.7■■■□□ 2.35
KRT28Q7Z3Y7 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC29.7■■■□□ 2.35
KRT28Q7Z3Y7 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC29.7■■■□□ 2.35
KRT28Q7Z3Y7 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC29.7■■■□□ 2.35
KRT28Q7Z3Y7 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC29.7■■■□□ 2.35
KRT28Q7Z3Y7 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.34
KRT28Q7Z3Y7 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC29.69■■■□□ 2.34
KRT28Q7Z3Y7 LINC00543-201ENST00000567234 1845 ntBASIC29.69■■■□□ 2.34
KRT28Q7Z3Y7 AC055733.4-201ENST00000638462 1354 ntBASIC29.69■■■□□ 2.34
KRT28Q7Z3Y7 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
KRT28Q7Z3Y7 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC29.69■■■□□ 2.34
KRT28Q7Z3Y7 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
KRT28Q7Z3Y7 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC29.69■■■□□ 2.34
KRT28Q7Z3Y7 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC29.68■■■□□ 2.34
KRT28Q7Z3Y7 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
KRT28Q7Z3Y7 PRORSD1P-201ENST00000295112 541 ntBASIC29.68■■■□□ 2.34
KRT28Q7Z3Y7 KRT18P29-201ENST00000397031 1267 ntBASIC29.68■■■□□ 2.34
KRT28Q7Z3Y7 MIR4758-201ENST00000577688 71 ntBASIC29.68■■■□□ 2.34
KRT28Q7Z3Y7 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC29.68■■■□□ 2.34
KRT28Q7Z3Y7 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC29.68■■■□□ 2.34
KRT28Q7Z3Y7 UQCRFS1P1-201ENST00000435169 820 ntBASIC29.67■■■□□ 2.34
KRT28Q7Z3Y7 RNA5SP413-201ENST00000516373 109 ntBASIC29.67■■■□□ 2.34
KRT28Q7Z3Y7 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC29.67■■■□□ 2.34
KRT28Q7Z3Y7 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
KRT28Q7Z3Y7 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC29.67■■■□□ 2.34
KRT28Q7Z3Y7 H19-210ENST00000439725 1929 ntTSL 2 BASIC29.67■■■□□ 2.34
KRT28Q7Z3Y7 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
KRT28Q7Z3Y7 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
KRT28Q7Z3Y7 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC29.66■■■□□ 2.34
KRT28Q7Z3Y7 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC29.66■■■□□ 2.34
KRT28Q7Z3Y7 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
KRT28Q7Z3Y7 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
KRT28Q7Z3Y7 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
KRT28Q7Z3Y7 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
KRT28Q7Z3Y7 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC29.65■■■□□ 2.34
KRT28Q7Z3Y7 AC010141.2-201ENST00000452426 721 ntBASIC29.65■■■□□ 2.34
KRT28Q7Z3Y7 KRT18P20-201ENST00000548986 1279 ntBASIC29.65■■■□□ 2.34
KRT28Q7Z3Y7 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC29.65■■■□□ 2.34
KRT28Q7Z3Y7 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
KRT28Q7Z3Y7 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC29.65■■■□□ 2.34
KRT28Q7Z3Y7 MARS-234ENST00000630571 216 ntTSL 5 BASIC29.65■■■□□ 2.34
KRT28Q7Z3Y7 MARS-235ENST00000630803 183 ntTSL 3 BASIC29.65■■■□□ 2.34
KRT28Q7Z3Y7 DUSP8P5-201ENST00000422884 1815 ntBASIC29.65■■■□□ 2.34
KRT28Q7Z3Y7 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
KRT28Q7Z3Y7 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC29.65■■■□□ 2.34
KRT28Q7Z3Y7 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
KRT28Q7Z3Y7 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
KRT28Q7Z3Y7 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC29.65■■■□□ 2.34
KRT28Q7Z3Y7 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
KRT28Q7Z3Y7 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC29.64■■■□□ 2.34
KRT28Q7Z3Y7 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC29.64■■■□□ 2.34
KRT28Q7Z3Y7 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC29.64■■■□□ 2.34
KRT28Q7Z3Y7 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC29.64■■■□□ 2.34
KRT28Q7Z3Y7 MIPEPP3-201ENST00000412105 444 ntBASIC29.64■■■□□ 2.34
KRT28Q7Z3Y7 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC29.64■■■□□ 2.34
KRT28Q7Z3Y7 AC138907.5-202ENST00000569484 235 ntBASIC29.64■■■□□ 2.34
KRT28Q7Z3Y7 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC29.64■■■□□ 2.34
KRT28Q7Z3Y7 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC29.64■■■□□ 2.34
KRT28Q7Z3Y7 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC29.64■■■□□ 2.33
KRT28Q7Z3Y7 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
KRT28Q7Z3Y7 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
KRT28Q7Z3Y7 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC29.63■■■□□ 2.33
KRT28Q7Z3Y7 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC29.63■■■□□ 2.33
KRT28Q7Z3Y7 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
KRT28Q7Z3Y7 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC29.63■■■□□ 2.33
KRT28Q7Z3Y7 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC29.62■■■□□ 2.33
KRT28Q7Z3Y7 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
KRT28Q7Z3Y7 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC29.62■■■□□ 2.33
KRT28Q7Z3Y7 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC29.62■■■□□ 2.33
KRT28Q7Z3Y7 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC29.62■■■□□ 2.33
Retrieved 100 of 98,524 protein–RNA pairs in 128 ms