Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC33.3■■■□□ 2.92
CDC42BPAQ5VT25 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC33.3■■■□□ 2.92
CDC42BPAQ5VT25 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC33.3■■■□□ 2.92
CDC42BPAQ5VT25 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC33.3■■■□□ 2.92
CDC42BPAQ5VT25 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC33.3■■■□□ 2.92
CDC42BPAQ5VT25 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC33.3■■■□□ 2.92
CDC42BPAQ5VT25 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC33.3■■■□□ 2.92
CDC42BPAQ5VT25 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC33.29■■■□□ 2.92
CDC42BPAQ5VT25 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC33.29■■■□□ 2.92
CDC42BPAQ5VT25 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC33.29■■■□□ 2.92
CDC42BPAQ5VT25 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC33.29■■■□□ 2.92
CDC42BPAQ5VT25 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC33.29■■■□□ 2.92
CDC42BPAQ5VT25 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC33.29■■■□□ 2.92
CDC42BPAQ5VT25 MIR4651-201ENST00000582622 73 ntBASIC33.29■■■□□ 2.92
CDC42BPAQ5VT25 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC33.29■■■□□ 2.92
CDC42BPAQ5VT25 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC33.29■■■□□ 2.92
CDC42BPAQ5VT25 AC055733.4-201ENST00000638462 1354 ntBASIC33.29■■■□□ 2.92
CDC42BPAQ5VT25 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC33.29■■■□□ 2.92
CDC42BPAQ5VT25 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC33.28■■■□□ 2.92
CDC42BPAQ5VT25 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC33.28■■■□□ 2.92
CDC42BPAQ5VT25 MDK-213ENST00000617138 635 ntTSL 2 BASIC33.28■■■□□ 2.92
CDC42BPAQ5VT25 AC092068.2-201ENST00000590491 1708 ntBASIC33.28■■■□□ 2.92
CDC42BPAQ5VT25 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC33.28■■■□□ 2.92
CDC42BPAQ5VT25 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC33.28■■■□□ 2.92
CDC42BPAQ5VT25 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC33.28■■■□□ 2.92
CDC42BPAQ5VT25 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC33.28■■■□□ 2.92
CDC42BPAQ5VT25 AL138781.1-201ENST00000566567 1274 ntBASIC33.28■■■□□ 2.92
CDC42BPAQ5VT25 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC33.28■■■□□ 2.92
CDC42BPAQ5VT25 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC33.28■■■□□ 2.92
CDC42BPAQ5VT25 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC33.27■■■□□ 2.92
CDC42BPAQ5VT25 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC33.27■■■□□ 2.92
CDC42BPAQ5VT25 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC33.27■■■□□ 2.92
CDC42BPAQ5VT25 AC010141.2-201ENST00000452426 721 ntBASIC33.27■■■□□ 2.92
CDC42BPAQ5VT25 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC33.27■■■□□ 2.92
CDC42BPAQ5VT25 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC33.27■■■□□ 2.92
CDC42BPAQ5VT25 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC33.27■■■□□ 2.92
CDC42BPAQ5VT25 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC33.26■■■□□ 2.92
CDC42BPAQ5VT25 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC33.26■■■□□ 2.92
CDC42BPAQ5VT25 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC33.26■■■□□ 2.92
CDC42BPAQ5VT25 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC33.26■■■□□ 2.92
CDC42BPAQ5VT25 KRT18P6-201ENST00000555540 1265 ntBASIC33.26■■■□□ 2.92
CDC42BPAQ5VT25 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC33.26■■■□□ 2.91
CDC42BPAQ5VT25 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC33.26■■■□□ 2.91
CDC42BPAQ5VT25 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC33.25■■■□□ 2.91
CDC42BPAQ5VT25 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC33.25■■■□□ 2.91
CDC42BPAQ5VT25 LINC01960-201ENST00000563759 1884 ntBASIC33.25■■■□□ 2.91
CDC42BPAQ5VT25 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC33.25■■■□□ 2.91
CDC42BPAQ5VT25 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC33.25■■■□□ 2.91
CDC42BPAQ5VT25 AC005181.1-201ENST00000604782 1256 ntBASIC33.25■■■□□ 2.91
CDC42BPAQ5VT25 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC33.24■■■□□ 2.91
CDC42BPAQ5VT25 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC33.24■■■□□ 2.91
CDC42BPAQ5VT25 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC33.24■■■□□ 2.91
CDC42BPAQ5VT25 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC33.24■■■□□ 2.91
CDC42BPAQ5VT25 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC33.24■■■□□ 2.91
CDC42BPAQ5VT25 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC33.24■■■□□ 2.91
CDC42BPAQ5VT25 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC33.23■■■□□ 2.91
CDC42BPAQ5VT25 SERP1-208ENST00000491660 830 ntTSL 2 BASIC33.23■■■□□ 2.91
CDC42BPAQ5VT25 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC33.23■■■□□ 2.91
CDC42BPAQ5VT25 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC33.23■■■□□ 2.91
CDC42BPAQ5VT25 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC33.23■■■□□ 2.91
CDC42BPAQ5VT25 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC33.23■■■□□ 2.91
CDC42BPAQ5VT25 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC33.23■■■□□ 2.91
CDC42BPAQ5VT25 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC33.22■■■□□ 2.91
CDC42BPAQ5VT25 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC33.22■■■□□ 2.91
CDC42BPAQ5VT25 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC33.22■■■□□ 2.91
CDC42BPAQ5VT25 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC33.22■■■□□ 2.91
CDC42BPAQ5VT25 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC33.22■■■□□ 2.91
CDC42BPAQ5VT25 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC33.22■■■□□ 2.91
CDC42BPAQ5VT25 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC33.22■■■□□ 2.91
CDC42BPAQ5VT25 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC33.22■■■□□ 2.91
CDC42BPAQ5VT25 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC33.22■■■□□ 2.91
CDC42BPAQ5VT25 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC33.22■■■□□ 2.91
CDC42BPAQ5VT25 AC069152.1-201ENST00000438030 544 ntBASIC33.22■■■□□ 2.91
CDC42BPAQ5VT25 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC33.22■■■□□ 2.91
CDC42BPAQ5VT25 CD99P1-205ENST00000527459 561 ntBASIC33.22■■■□□ 2.91
CDC42BPAQ5VT25 BRI3-207ENST00000539286 699 ntTSL 2 BASIC33.22■■■□□ 2.91
CDC42BPAQ5VT25 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC33.22■■■□□ 2.91
CDC42BPAQ5VT25 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC33.22■■■□□ 2.91
CDC42BPAQ5VT25 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC33.22■■■□□ 2.91
CDC42BPAQ5VT25 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC33.21■■■□□ 2.91
CDC42BPAQ5VT25 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC33.21■■■□□ 2.91
CDC42BPAQ5VT25 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC33.21■■■□□ 2.91
CDC42BPAQ5VT25 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC33.21■■■□□ 2.91
CDC42BPAQ5VT25 PARP1-210ENST00000629232 477 ntTSL 5 BASIC33.21■■■□□ 2.91
CDC42BPAQ5VT25 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC33.21■■■□□ 2.91
CDC42BPAQ5VT25 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC33.21■■■□□ 2.91
CDC42BPAQ5VT25 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC33.21■■■□□ 2.91
CDC42BPAQ5VT25 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC33.21■■■□□ 2.91
CDC42BPAQ5VT25 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC33.21■■■□□ 2.91
CDC42BPAQ5VT25 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC33.2■■■□□ 2.91
CDC42BPAQ5VT25 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC33.2■■■□□ 2.9
CDC42BPAQ5VT25 AC007322.1-201ENST00000426983 750 ntBASIC33.19■■■□□ 2.9
CDC42BPAQ5VT25 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC33.19■■■□□ 2.9
CDC42BPAQ5VT25 AC138907.5-202ENST00000569484 235 ntBASIC33.19■■■□□ 2.9
CDC42BPAQ5VT25 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC33.19■■■□□ 2.9
CDC42BPAQ5VT25 CYP2T1P-201ENST00000432607 1285 ntBASIC33.19■■■□□ 2.9
CDC42BPAQ5VT25 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC33.19■■■□□ 2.9
CDC42BPAQ5VT25 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC33.18■■■□□ 2.9
CDC42BPAQ5VT25 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC33.18■■■□□ 2.9
CDC42BPAQ5VT25 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC33.18■■■□□ 2.9
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms