Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
CDH6P55285 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
CDH6P55285 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CDH6P55285 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CDH6P55285 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC22.57■■□□□ 1.2
CDH6P55285 AC068587.7-201ENST00000641602 218 ntBASIC22.57■■□□□ 1.2
CDH6P55285 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CDH6P55285 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
CDH6P55285 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CDH6P55285 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CDH6P55285 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
CDH6P55285 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CDH6P55285 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
CDH6P55285 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
CDH6P55285 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
CDH6P55285 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
CDH6P55285 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC22.56■■□□□ 1.2
CDH6P55285 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CDH6P55285 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CDH6P55285 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CDH6P55285 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CDH6P55285 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CDH6P55285 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CDH6P55285 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
CDH6P55285 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
CDH6P55285 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC22.55■■□□□ 1.2
CDH6P55285 UNC93B3-201ENST00000308076 687 ntBASIC22.55■■□□□ 1.2
CDH6P55285 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CDH6P55285 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
CDH6P55285 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC22.55■■□□□ 1.2
CDH6P55285 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC22.55■■□□□ 1.2
CDH6P55285 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
CDH6P55285 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
CDH6P55285 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CDH6P55285 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
CDH6P55285 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CDH6P55285 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC22.54■■□□□ 1.2
CDH6P55285 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC22.54■■□□□ 1.2
CDH6P55285 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC22.54■■□□□ 1.2
CDH6P55285 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
CDH6P55285 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
CDH6P55285 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CDH6P55285 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC22.54■■□□□ 1.2
CDH6P55285 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CDH6P55285 PTMA-205ENST00000410064 814 ntTSL 2 BASIC22.54■■□□□ 1.2
CDH6P55285 SLC47A1P1-202ENST00000449666 945 ntBASIC22.54■■□□□ 1.2
CDH6P55285 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC22.54■■□□□ 1.2
CDH6P55285 AC079089.2-201ENST00000531211 1277 ntBASIC22.54■■□□□ 1.2
CDH6P55285 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CDH6P55285 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
CDH6P55285 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CDH6P55285 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CDH6P55285 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC22.54■■□□□ 1.2
CDH6P55285 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CDH6P55285 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CDH6P55285 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC22.54■■□□□ 1.2
CDH6P55285 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
CDH6P55285 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CDH6P55285 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CDH6P55285 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CDH6P55285 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
CDH6P55285 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC22.53■■□□□ 1.2
CDH6P55285 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC22.53■■□□□ 1.2
CDH6P55285 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC22.53■■□□□ 1.2
CDH6P55285 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC22.53■■□□□ 1.2
CDH6P55285 AC087239.1-201ENST00000622671 572 ntBASIC22.53■■□□□ 1.2
CDH6P55285 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC22.53■■□□□ 1.2
CDH6P55285 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CDH6P55285 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CDH6P55285 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CDH6P55285 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
CDH6P55285 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC22.52■■□□□ 1.2
CDH6P55285 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CDH6P55285 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
CDH6P55285 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
CDH6P55285 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CDH6P55285 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC22.52■■□□□ 1.19
CDH6P55285 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CDH6P55285 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CDH6P55285 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
CDH6P55285 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CDH6P55285 AC010141.3-201ENST00000456659 717 ntBASIC22.51■■□□□ 1.19
CDH6P55285 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC22.51■■□□□ 1.19
CDH6P55285 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
CDH6P55285 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CDH6P55285 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
CDH6P55285 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CDH6P55285 WWC2-AS2-201ENST00000578387 2183 ntBASIC22.5■■□□□ 1.19
CDH6P55285 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CDH6P55285 SNX3-202ENST00000349379 890 ntTSL 2 BASIC22.5■■□□□ 1.19
CDH6P55285 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC22.5■■□□□ 1.19
CDH6P55285 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC22.5■■□□□ 1.19
CDH6P55285 MIR4767-201ENST00000582827 78 ntBASIC22.5■■□□□ 1.19
CDH6P55285 AL136162.1-201ENST00000607711 1078 ntBASIC22.5■■□□□ 1.19
CDH6P55285 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC22.5■■□□□ 1.19
CDH6P55285 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC22.5■■□□□ 1.19
CDH6P55285 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CDH6P55285 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CDH6P55285 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
CDH6P55285 AC024257.2-201ENST00000549699 147 ntBASIC22.49■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms