Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
HMGCLP35914 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC21.65■■□□□ 1.06
HMGCLP35914 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
HMGCLP35914 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC21.65■■□□□ 1.06
HMGCLP35914 OR7E47P-201ENST00000546390 1422 ntBASIC21.64■■□□□ 1.06
HMGCLP35914 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
HMGCLP35914 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
HMGCLP35914 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
HMGCLP35914 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
HMGCLP35914 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
HMGCLP35914 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
HMGCLP35914 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
HMGCLP35914 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
HMGCLP35914 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
HMGCLP35914 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
HMGCLP35914 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
HMGCLP35914 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
HMGCLP35914 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
HMGCLP35914 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC21.63■■□□□ 1.05
HMGCLP35914 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC21.63■■□□□ 1.05
HMGCLP35914 LSR-203ENST00000360798 1963 ntTSL 2 BASIC21.63■■□□□ 1.05
HMGCLP35914 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
HMGCLP35914 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
HMGCLP35914 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.63■■□□□ 1.05
HMGCLP35914 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
HMGCLP35914 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
HMGCLP35914 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
HMGCLP35914 STOX2-205ENST00000513034 807 ntTSL 3 BASIC21.63■■□□□ 1.05
HMGCLP35914 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC21.63■■□□□ 1.05
HMGCLP35914 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC21.63■■□□□ 1.05
HMGCLP35914 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC21.63■■□□□ 1.05
HMGCLP35914 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
HMGCLP35914 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
HMGCLP35914 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
HMGCLP35914 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
HMGCLP35914 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC21.63■■□□□ 1.05
HMGCLP35914 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC21.62■■□□□ 1.05
HMGCLP35914 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC21.62■■□□□ 1.05
HMGCLP35914 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
HMGCLP35914 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC21.62■■□□□ 1.05
HMGCLP35914 SMUG1P1-201ENST00000590640 811 ntBASIC21.62■■□□□ 1.05
HMGCLP35914 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
HMGCLP35914 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
HMGCLP35914 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
HMGCLP35914 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC21.62■■□□□ 1.05
HMGCLP35914 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC21.62■■□□□ 1.05
HMGCLP35914 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
HMGCLP35914 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
HMGCLP35914 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
HMGCLP35914 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
HMGCLP35914 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
HMGCLP35914 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
HMGCLP35914 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
HMGCLP35914 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
HMGCLP35914 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
HMGCLP35914 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
HMGCLP35914 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
HMGCLP35914 RHOF-204ENST00000537265 699 ntTSL 2 BASIC21.61■■□□□ 1.05
HMGCLP35914 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
HMGCLP35914 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
HMGCLP35914 AC092053.2-201ENST00000640557 1818 ntBASIC21.61■■□□□ 1.05
HMGCLP35914 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
HMGCLP35914 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
HMGCLP35914 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
HMGCLP35914 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
HMGCLP35914 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
HMGCLP35914 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
HMGCLP35914 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC21.6■■□□□ 1.05
HMGCLP35914 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
HMGCLP35914 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
HMGCLP35914 IRS3P-201ENST00000223076 1006 ntBASIC21.6■■□□□ 1.05
HMGCLP35914 AC105233.4-201ENST00000642045 216 ntBASIC21.6■■□□□ 1.05
HMGCLP35914 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
HMGCLP35914 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
HMGCLP35914 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
HMGCLP35914 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
HMGCLP35914 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
HMGCLP35914 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC21.59■■□□□ 1.05
HMGCLP35914 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC21.59■■□□□ 1.05
HMGCLP35914 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
HMGCLP35914 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
HMGCLP35914 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
HMGCLP35914 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
HMGCLP35914 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
HMGCLP35914 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
HMGCLP35914 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
HMGCLP35914 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
HMGCLP35914 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
HMGCLP35914 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
HMGCLP35914 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
HMGCLP35914 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC21.58■■□□□ 1.05
HMGCLP35914 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
HMGCLP35914 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
HMGCLP35914 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC21.58■■□□□ 1.05
HMGCLP35914 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC21.58■■□□□ 1.05
HMGCLP35914 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
HMGCLP35914 EP400NL-214ENST00000641289 2402 ntBASIC21.58■■□□□ 1.04
HMGCLP35914 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.04
HMGCLP35914 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
HMGCLP35914 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms