Protein–RNA interactions for Protein: P25441

RPC53, DNA-directed RNA polymerase III subunit RPC4, yeast

Predictions only

Length 422 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
RPC53	P25441	SUP54	tL(CAA)G2	82 nt		4.13	□□□□□ -1.75
RPC53	P25441	tL(CAA)G3	tL(CAA)G3	82 nt		4.13	□□□□□ -1.75
RPC53	P25441	tL(CAA)K	tL(CAA)K	82 nt		4.13	□□□□□ -1.75
RPC53	P25441	tL(CAA)L	tL(CAA)L	82 nt		4.13	□□□□□ -1.75
RPC53	P25441	tL(CAA)M	tL(CAA)M	82 nt		4.13	□□□□□ -1.75
RPC53	P25441	tL(CAA)N	tL(CAA)N	82 nt		4.13	□□□□□ -1.75
RPC53	P25441	YKE4	YIL023C	1041 nt		4.13	□□□□□ -1.75
RPC53	P25441	DID4	YKL002W	699 nt		4.13	□□□□□ -1.75
RPC53	P25441	SRP40	YKR092C	1221 nt		4.13	□□□□□ -1.75
RPC53	P25441	NIT3	YLR351C	876 nt		4.13	□□□□□ -1.75
RPC53	P25441	YMR075C-A	YMR075C-A	366 nt		4.13	□□□□□ -1.75
RPC53	P25441	MRPS17	YMR188C	714 nt		4.13	□□□□□ -1.75
RPC53	P25441	MLH2	YLR035C	2088 nt		4.13	□□□□□ -1.75
RPC53	P25441	OAF3	YKR064W	2592 nt		4.12	□□□□□ -1.75
RPC53	P25441	FAT1	YBR041W	2010 nt		4.12	□□□□□ -1.75
RPC53	P25441	OTU1	YFL044C	906 nt		4.12	□□□□□ -1.75
RPC53	P25441	RTA1	YGR213C	954 nt		4.12	□□□□□ -1.75
RPC53	P25441	OMA1	YKR087C	1038 nt		4.12	□□□□□ -1.75
RPC53	P25441	YLR156W	YLR156W	345 nt		4.12	□□□□□ -1.75
RPC53	P25441	YLR159W	YLR159W	345 nt		4.12	□□□□□ -1.75
RPC53	P25441	YLR161W	YLR161W	345 nt		4.12	□□□□□ -1.75
RPC53	P25441	GPI2	YPL076W	843 nt		4.12	□□□□□ -1.75
RPC53	P25441	PST1	YDR055W	1335 nt		4.12	□□□□□ -1.75
RPC53	P25441	CDC14	YFR028C	1656 nt		4.12	□□□□□ -1.75
RPC53	P25441	DHR2	YKL078W	2208 nt		4.11	□□□□□ -1.75
RPC53	P25441	NOG1	YPL093W	1944 nt		4.11	□□□□□ -1.75
RPC53	P25441	PGS1	YCL004W	1566 nt		4.11	□□□□□ -1.75
RPC53	P25441	RRP8	YDR083W	1179 nt		4.11	□□□□□ -1.75
RPC53	P25441	YEL074W	YEL074W	339 nt		4.11	□□□□□ -1.75
RPC53	P25441	DPH1	YIL103W	1278 nt		4.11	□□□□□ -1.75
RPC53	P25441	ARG80	YMR042W	534 nt		4.11	□□□□□ -1.75
RPC53	P25441	CYC2	YOR037W	1101 nt		4.11	□□□□□ -1.75
RPC53	P25441	ECM8	YBR076W	1065 nt		4.11	□□□□□ -1.75
RPC53	P25441	MTH1	YDR277C	1302 nt		4.11	□□□□□ -1.75
RPC53	P25441	MGA1	YGR249W	1371 nt		4.11	□□□□□ -1.75
RPC53	P25441	SSU1	YPL092W	1377 nt		4.11	□□□□□ -1.75
RPC53	P25441	ERG5	YMR015C	1617 nt		4.1	□□□□□ -1.75
RPC53	P25441	EPO1	YMR124W	2832 nt		4.1	□□□□□ -1.75
RPC53	P25441	DDI2	YFL061W	678 nt		4.1	□□□□□ -1.75
RPC53	P25441	YLR154W-B	YLR154W-B	165 nt		4.1	□□□□□ -1.75
RPC53	P25441	DDI3	YNL335W	678 nt		4.1	□□□□□ -1.75
RPC53	P25441	HPA2	YPR193C	471 nt		4.1	□□□□□ -1.75
RPC53	P25441	PEP7	YDR323C	1548 nt		4.1	□□□□□ -1.75
RPC53	P25441	APL4	YPR029C	2499 nt		4.1	□□□□□ -1.75
RPC53	P25441	MCM7	YBR202W	2538 nt		4.09	□□□□□ -1.75
RPC53	P25441	PCL2	YDL127W	927 nt		4.09	□□□□□ -1.75
RPC53	P25441	KEG1	YFR042W	603 nt		4.09	□□□□□ -1.75
RPC53	P25441	GLO4	YOR040W	858 nt		4.09	□□□□□ -1.75
RPC53	P25441	FKH2	YNL068C	2589 nt		4.09	□□□□□ -1.75
RPC53	P25441	KTR6	YPL053C	1341 nt		4.09	□□□□□ -1.75
RPC53	P25441	YIG1	YPL201C	1386 nt		4.09	□□□□□ -1.75
RPC53	P25441	DBP3	YGL078C	1572 nt		4.09	□□□□□ -1.75
RPC53	P25441	YRM1	YOR172W	2361 nt		4.09	□□□□□ -1.76
RPC53	P25441	HOM2	YDR158W	1098 nt		4.08	□□□□□ -1.76
RPC53	P25441	YGR026W	YGR026W	837 nt		4.08	□□□□□ -1.76
RPC53	P25441	SGN1	YIR001C	753 nt		4.08	□□□□□ -1.76
RPC53	P25441	DSN1	YIR010W	1731 nt		4.08	□□□□□ -1.76
RPC53	P25441	TEX1	YNL253W	1269 nt		4.08	□□□□□ -1.76
RPC53	P25441	REX4	YOL080C	870 nt		4.08	□□□□□ -1.76
RPC53	P25441	ULP1	YPL020C	1866 nt		4.08	□□□□□ -1.76
RPC53	P25441	FUN12	YAL035W	3009 nt		4.08	□□□□□ -1.76
RPC53	P25441	VID27	YNL212W	2349 nt		4.07	□□□□□ -1.76
RPC53	P25441	AEP3	YPL005W	1821 nt		4.07	□□□□□ -1.76
RPC53	P25441	CIT1	YNR001C	1440 nt		4.07	□□□□□ -1.76
RPC53	P25441	AAD3	YCR107W	1092 nt		4.07	□□□□□ -1.76
RPC53	P25441	BSC2	YDR275W	708 nt		4.07	□□□□□ -1.76
RPC53	P25441	TFA2	YKR062W	987 nt		4.07	□□□□□ -1.76
RPC53	P25441	COQ5	YML110C	924 nt		4.07	□□□□□ -1.76
RPC53	P25441	YNL162W-A	YNL162W-A	219 nt		4.07	□□□□□ -1.76
RPC53	P25441	NDJ1	YOL104C	1059 nt		4.07	□□□□□ -1.76
RPC53	P25441	HSH49	YOR319W	642 nt		4.07	□□□□□ -1.76
RPC53	P25441	DAP2	YHR028C	2457 nt		4.07	□□□□□ -1.76
RPC53	P25441	EMC1	YCL045C	2283 nt		4.07	□□□□□ -1.76
RPC53	P25441	YDL071C	YDL071C	375 nt		4.06	□□□□□ -1.76
RPC53	P25441	YDL186W	YDL186W	834 nt		4.06	□□□□□ -1.76
RPC53	P25441	YOS1	YER074W-A	258 nt		4.06	□□□□□ -1.76
RPC53	P25441	YGR051C	YGR051C	324 nt		4.06	□□□□□ -1.76
RPC53	P25441	IMP3	YHR148W	552 nt		4.06	□□□□□ -1.76
RPC53	P25441	YJR112W-A	YJR112W-A	330 nt		4.06	□□□□□ -1.76
RPC53	P25441	COX19	YLL018C-A	297 nt		4.06	□□□□□ -1.76
RPC53	P25441	HMX1	YLR205C	954 nt		4.06	□□□□□ -1.76
RPC53	P25441	YBR242W	YBR242W	717 nt		4.06	□□□□□ -1.76
RPC53	P25441	YCL001W-A	YCL001W-A	462 nt		4.06	□□□□□ -1.76
RPC53	P25441	RPO31	YOR116C	4383 nt		4.06	□□□□□ -1.76
RPC53	P25441	YKL050C	YKL050C	2769 nt		4.06	□□□□□ -1.76
RPC53	P25441	ECM16	YMR128W	3804 nt		4.06	□□□□□ -1.76
RPC53	P25441	NRP1	YDL167C	2160 nt		4.06	□□□□□ -1.76
RPC53	P25441	SDS23	YGL056C	1584 nt		4.06	□□□□□ -1.76
RPC53	P25441	CUE3	YGL110C	1875 nt		4.05	□□□□□ -1.76
RPC53	P25441	TRM12	YML005W	1389 nt		4.05	□□□□□ -1.76
RPC53	P25441	ATG26	YLR189C	3597 nt		4.05	□□□□□ -1.76
RPC53	P25441	YCR015C	YCR015C	954 nt		4.05	□□□□□ -1.76
RPC53	P25441	RPS18A	YDR450W	441 nt		4.05	□□□□□ -1.76
RPC53	P25441	LAC1	YKL008C	1257 nt		4.05	□□□□□ -1.76
RPC53	P25441	URA4	YLR420W	1095 nt		4.05	□□□□□ -1.76
RPC53	P25441	MDJ2	YNL328C	441 nt		4.05	□□□□□ -1.76
RPC53	P25441	USV1	YPL230W	1176 nt		4.05	□□□□□ -1.76
RPC53	P25441	DSS1	YMR287C	2910 nt		4.05	□□□□□ -1.76
RPC53	P25441	SER3	YER081W	1410 nt		4.04	□□□□□ -1.76
RPC53	P25441	SWH1	YAR042W	3567 nt		4.04	□□□□□ -1.76

Retrieved 100 of 7,029 protein–RNA pairs in 24.4 ms