Protein–RNA interactions for Protein: O43736

ITM2A, Integral membrane protein 2A, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2AO43736 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC21.28■■□□□ 1
ITM2AO43736 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC21.28■■□□□ 1
ITM2AO43736 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
ITM2AO43736 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
ITM2AO43736 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC21.27■■□□□ 1
ITM2AO43736 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
ITM2AO43736 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
ITM2AO43736 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC21.27■■□□□ 1
ITM2AO43736 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC21.27■■□□□ 1
ITM2AO43736 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC21.27■■□□□ 1
ITM2AO43736 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC21.27■■□□□ 1
ITM2AO43736 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
ITM2AO43736 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC21.27■■□□□ 1
ITM2AO43736 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC21.27■□□□□ 0.99
ITM2AO43736 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
ITM2AO43736 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ITM2AO43736 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
ITM2AO43736 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
ITM2AO43736 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
ITM2AO43736 TUB-203ENST00000534099 1759 ntTSL 2 BASIC21.26■□□□□ 0.99
ITM2AO43736 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
ITM2AO43736 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ITM2AO43736 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
ITM2AO43736 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
ITM2AO43736 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC21.26■□□□□ 0.99
ITM2AO43736 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC21.26■□□□□ 0.99
ITM2AO43736 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ITM2AO43736 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC21.26■□□□□ 0.99
ITM2AO43736 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
ITM2AO43736 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
ITM2AO43736 FEM1AP4-201ENST00000443167 1987 ntBASIC21.26■□□□□ 0.99
ITM2AO43736 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
ITM2AO43736 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC21.26■□□□□ 0.99
ITM2AO43736 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
ITM2AO43736 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
ITM2AO43736 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC21.25■□□□□ 0.99
ITM2AO43736 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ITM2AO43736 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ITM2AO43736 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
ITM2AO43736 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ITM2AO43736 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC21.25■□□□□ 0.99
ITM2AO43736 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
ITM2AO43736 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ITM2AO43736 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC21.25■□□□□ 0.99
ITM2AO43736 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC21.25■□□□□ 0.99
ITM2AO43736 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC21.24■□□□□ 0.99
ITM2AO43736 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC21.24■□□□□ 0.99
ITM2AO43736 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
ITM2AO43736 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
ITM2AO43736 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
ITM2AO43736 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC21.24■□□□□ 0.99
ITM2AO43736 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
ITM2AO43736 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
ITM2AO43736 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
ITM2AO43736 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ITM2AO43736 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ITM2AO43736 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC21.24■□□□□ 0.99
ITM2AO43736 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
ITM2AO43736 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC21.24■□□□□ 0.99
ITM2AO43736 AC026471.6-201ENST00000622954 1905 ntBASIC21.23■□□□□ 0.99
ITM2AO43736 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
ITM2AO43736 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
ITM2AO43736 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC21.23■□□□□ 0.99
ITM2AO43736 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
ITM2AO43736 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC21.23■□□□□ 0.99
ITM2AO43736 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
ITM2AO43736 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC21.23■□□□□ 0.99
ITM2AO43736 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
ITM2AO43736 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
ITM2AO43736 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
ITM2AO43736 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
ITM2AO43736 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
ITM2AO43736 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ITM2AO43736 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
ITM2AO43736 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC21.22■□□□□ 0.99
ITM2AO43736 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ITM2AO43736 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
ITM2AO43736 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
ITM2AO43736 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC21.22■□□□□ 0.99
ITM2AO43736 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC21.22■□□□□ 0.99
ITM2AO43736 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
ITM2AO43736 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
ITM2AO43736 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
ITM2AO43736 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC21.21■□□□□ 0.99
ITM2AO43736 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ITM2AO43736 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ITM2AO43736 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC21.21■□□□□ 0.99
ITM2AO43736 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC21.21■□□□□ 0.99
ITM2AO43736 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ITM2AO43736 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
ITM2AO43736 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ITM2AO43736 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ITM2AO43736 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC21.21■□□□□ 0.99
ITM2AO43736 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
ITM2AO43736 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ITM2AO43736 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC21.2■□□□□ 0.99
ITM2AO43736 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.99
ITM2AO43736 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
ITM2AO43736 AL157384.1-201ENST00000445995 2473 ntBASIC21.2■□□□□ 0.98
ITM2AO43736 C17orf82-201ENST00000623772 1530 ntBASIC21.2■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms