Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRGV1A0A0A0MS02 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRGV1A0A0A0MS02 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRGV1A0A0A0MS02 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRGV1A0A0A0MS02 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
TRGV1A0A0A0MS02 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRGV1A0A0A0MS02 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC15.7■□□□□ 0.1
TRGV1A0A0A0MS02 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRGV1A0A0A0MS02 AC080038.3-201ENST00000623346 1952 ntBASIC15.7■□□□□ 0.1
TRGV1A0A0A0MS02 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRGV1A0A0A0MS02 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRGV1A0A0A0MS02 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
TRGV1A0A0A0MS02 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRGV1A0A0A0MS02 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC15.7■□□□□ 0.1
TRGV1A0A0A0MS02 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
TRGV1A0A0A0MS02 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC15.7■□□□□ 0.1
TRGV1A0A0A0MS02 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRGV1A0A0A0MS02 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC15.69■□□□□ 0.1
TRGV1A0A0A0MS02 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC15.69■□□□□ 0.1
TRGV1A0A0A0MS02 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRGV1A0A0A0MS02 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRGV1A0A0A0MS02 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRGV1A0A0A0MS02 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
TRGV1A0A0A0MS02 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC15.69■□□□□ 0.1
TRGV1A0A0A0MS02 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC15.69■□□□□ 0.1
TRGV1A0A0A0MS02 AIRN-201ENST00000601203 4374 ntBASIC15.69■□□□□ 0.1
TRGV1A0A0A0MS02 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRGV1A0A0A0MS02 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC15.69■□□□□ 0.1
TRGV1A0A0A0MS02 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRGV1A0A0A0MS02 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC15.69■□□□□ 0.1
TRGV1A0A0A0MS02 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC15.69■□□□□ 0.1
TRGV1A0A0A0MS02 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
TRGV1A0A0A0MS02 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
TRGV1A0A0A0MS02 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRGV1A0A0A0MS02 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
TRGV1A0A0A0MS02 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
TRGV1A0A0A0MS02 LSR-203ENST00000360798 1963 ntTSL 2 BASIC15.69■□□□□ 0.1
TRGV1A0A0A0MS02 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC15.69■□□□□ 0.1
TRGV1A0A0A0MS02 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRGV1A0A0A0MS02 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRGV1A0A0A0MS02 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC15.68■□□□□ 0.1
TRGV1A0A0A0MS02 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRGV1A0A0A0MS02 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC15.68■□□□□ 0.1
TRGV1A0A0A0MS02 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
TRGV1A0A0A0MS02 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC15.68■□□□□ 0.1
TRGV1A0A0A0MS02 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRGV1A0A0A0MS02 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC15.68■□□□□ 0.1
TRGV1A0A0A0MS02 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRGV1A0A0A0MS02 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRGV1A0A0A0MS02 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC15.68■□□□□ 0.1
TRGV1A0A0A0MS02 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC15.68■□□□□ 0.1
TRGV1A0A0A0MS02 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
TRGV1A0A0A0MS02 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
TRGV1A0A0A0MS02 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRGV1A0A0A0MS02 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRGV1A0A0A0MS02 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
TRGV1A0A0A0MS02 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC15.67■□□□□ 0.1
TRGV1A0A0A0MS02 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRGV1A0A0A0MS02 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRGV1A0A0A0MS02 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRGV1A0A0A0MS02 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
TRGV1A0A0A0MS02 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRGV1A0A0A0MS02 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRGV1A0A0A0MS02 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC15.67■□□□□ 0.1
TRGV1A0A0A0MS02 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC15.67■□□□□ 0.1
TRGV1A0A0A0MS02 SERBP1P1-201ENST00000396021 1160 ntBASIC15.67■□□□□ 0.1
TRGV1A0A0A0MS02 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC15.67■□□□□ 0.1
TRGV1A0A0A0MS02 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC15.67■□□□□ 0.1
TRGV1A0A0A0MS02 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRGV1A0A0A0MS02 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRGV1A0A0A0MS02 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRGV1A0A0A0MS02 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC15.67■□□□□ 0.1
TRGV1A0A0A0MS02 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRGV1A0A0A0MS02 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC15.67■□□□□ 0.1
TRGV1A0A0A0MS02 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRGV1A0A0A0MS02 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRGV1A0A0A0MS02 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRGV1A0A0A0MS02 AC092053.2-201ENST00000640557 1818 ntBASIC15.66■□□□□ 0.1
TRGV1A0A0A0MS02 AC008406.3-201ENST00000620001 1374 ntBASIC15.66■□□□□ 0.1
TRGV1A0A0A0MS02 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRGV1A0A0A0MS02 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRGV1A0A0A0MS02 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC15.66■□□□□ 0.1
TRGV1A0A0A0MS02 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRGV1A0A0A0MS02 HES6-206ENST00000409574 738 ntTSL 2 BASIC15.66■□□□□ 0.1
TRGV1A0A0A0MS02 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC15.66■□□□□ 0.1
TRGV1A0A0A0MS02 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC15.66■□□□□ 0.1
TRGV1A0A0A0MS02 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRGV1A0A0A0MS02 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC15.66■□□□□ 0.1
TRGV1A0A0A0MS02 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
TRGV1A0A0A0MS02 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRGV1A0A0A0MS02 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
TRGV1A0A0A0MS02 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRGV1A0A0A0MS02 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRGV1A0A0A0MS02 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC15.66■□□□□ 0.1
TRGV1A0A0A0MS02 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRGV1A0A0A0MS02 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRGV1A0A0A0MS02 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRGV1A0A0A0MS02 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC15.66■□□□□ 0.1
TRGV1A0A0A0MS02 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRGV1A0A0A0MS02 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms