Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC21.07■□□□□ 0.96
PCDHGA3Q9Y5H0 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
PCDHGA3Q9Y5H0 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC21.07■□□□□ 0.96
PCDHGA3Q9Y5H0 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PCDHGA3Q9Y5H0 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
PCDHGA3Q9Y5H0 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PCDHGA3Q9Y5H0 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
PCDHGA3Q9Y5H0 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PCDHGA3Q9Y5H0 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PCDHGA3Q9Y5H0 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PCDHGA3Q9Y5H0 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PCDHGA3Q9Y5H0 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
PCDHGA3Q9Y5H0 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PCDHGA3Q9Y5H0 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PCDHGA3Q9Y5H0 STX4-202ENST00000394998 1498 ntTSL 2 BASIC21.07■□□□□ 0.96
PCDHGA3Q9Y5H0 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC21.07■□□□□ 0.96
PCDHGA3Q9Y5H0 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
PCDHGA3Q9Y5H0 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PCDHGA3Q9Y5H0 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
PCDHGA3Q9Y5H0 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PCDHGA3Q9Y5H0 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC21.06■□□□□ 0.96
PCDHGA3Q9Y5H0 GXYLT1P2-201ENST00000433312 1230 ntBASIC21.06■□□□□ 0.96
PCDHGA3Q9Y5H0 AC105233.4-201ENST00000642045 216 ntBASIC21.06■□□□□ 0.96
PCDHGA3Q9Y5H0 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PCDHGA3Q9Y5H0 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
PCDHGA3Q9Y5H0 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
PCDHGA3Q9Y5H0 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PCDHGA3Q9Y5H0 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PCDHGA3Q9Y5H0 AL117328.2-201ENST00000624617 1940 ntBASIC21.06■□□□□ 0.96
PCDHGA3Q9Y5H0 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC21.05■□□□□ 0.96
PCDHGA3Q9Y5H0 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC21.05■□□□□ 0.96
PCDHGA3Q9Y5H0 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
PCDHGA3Q9Y5H0 NT5C3AP1-201ENST00000394500 1012 ntBASIC21.05■□□□□ 0.96
PCDHGA3Q9Y5H0 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC21.05■□□□□ 0.96
PCDHGA3Q9Y5H0 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC21.05■□□□□ 0.96
PCDHGA3Q9Y5H0 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PCDHGA3Q9Y5H0 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PCDHGA3Q9Y5H0 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDHGA3Q9Y5H0 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDHGA3Q9Y5H0 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDHGA3Q9Y5H0 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
PCDHGA3Q9Y5H0 AC004911.1-201ENST00000416316 871 ntBASIC21.04■□□□□ 0.96
PCDHGA3Q9Y5H0 DLX3-202ENST00000512495 834 ntTSL 2 BASIC21.04■□□□□ 0.96
PCDHGA3Q9Y5H0 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC21.04■□□□□ 0.96
PCDHGA3Q9Y5H0 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC21.04■□□□□ 0.96
PCDHGA3Q9Y5H0 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
PCDHGA3Q9Y5H0 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PCDHGA3Q9Y5H0 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PCDHGA3Q9Y5H0 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDHGA3Q9Y5H0 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PCDHGA3Q9Y5H0 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PCDHGA3Q9Y5H0 ABCB10P4-201ENST00000566803 2184 ntBASIC21.03■□□□□ 0.96
PCDHGA3Q9Y5H0 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PCDHGA3Q9Y5H0 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC21.03■□□□□ 0.96
PCDHGA3Q9Y5H0 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
PCDHGA3Q9Y5H0 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PCDHGA3Q9Y5H0 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PCDHGA3Q9Y5H0 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC21.03■□□□□ 0.96
PCDHGA3Q9Y5H0 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC21.03■□□□□ 0.96
PCDHGA3Q9Y5H0 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC21.03■□□□□ 0.96
PCDHGA3Q9Y5H0 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PCDHGA3Q9Y5H0 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC21.03■□□□□ 0.96
PCDHGA3Q9Y5H0 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC21.03■□□□□ 0.96
PCDHGA3Q9Y5H0 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
PCDHGA3Q9Y5H0 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
PCDHGA3Q9Y5H0 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PCDHGA3Q9Y5H0 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC21.03■□□□□ 0.96
PCDHGA3Q9Y5H0 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PCDHGA3Q9Y5H0 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
PCDHGA3Q9Y5H0 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC21.03■□□□□ 0.96
PCDHGA3Q9Y5H0 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PCDHGA3Q9Y5H0 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PCDHGA3Q9Y5H0 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
PCDHGA3Q9Y5H0 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC21.02■□□□□ 0.96
PCDHGA3Q9Y5H0 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
PCDHGA3Q9Y5H0 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PCDHGA3Q9Y5H0 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
PCDHGA3Q9Y5H0 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PCDHGA3Q9Y5H0 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
PCDHGA3Q9Y5H0 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
PCDHGA3Q9Y5H0 MFF-208ENST00000409616 1247 ntTSL 5 BASIC21.02■□□□□ 0.96
PCDHGA3Q9Y5H0 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC21.02■□□□□ 0.96
PCDHGA3Q9Y5H0 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC21.02■□□□□ 0.96
PCDHGA3Q9Y5H0 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
PCDHGA3Q9Y5H0 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC21.02■□□□□ 0.96
PCDHGA3Q9Y5H0 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
PCDHGA3Q9Y5H0 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PCDHGA3Q9Y5H0 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC21.02■□□□□ 0.96
PCDHGA3Q9Y5H0 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
PCDHGA3Q9Y5H0 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
PCDHGA3Q9Y5H0 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC21.02■□□□□ 0.95
PCDHGA3Q9Y5H0 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PCDHGA3Q9Y5H0 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PCDHGA3Q9Y5H0 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCDHGA3Q9Y5H0 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC21.01■□□□□ 0.95
PCDHGA3Q9Y5H0 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
PCDHGA3Q9Y5H0 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PCDHGA3Q9Y5H0 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC21.01■□□□□ 0.95
PCDHGA3Q9Y5H0 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC21.01■□□□□ 0.95
PCDHGA3Q9Y5H0 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms