Protein–RNA interactions for Protein: Q96MT7

CFAP44, Cilia- and flagella-associated protein 44, humanhuman

Predictions only

Length 982 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP44Q96MT7 SP2-202ENST00000613139 908 ntTSL 5 BASIC28.3■■■□□ 2.12
CFAP44Q96MT7 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
CFAP44Q96MT7 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC28.29■■■□□ 2.12
CFAP44Q96MT7 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
CFAP44Q96MT7 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
CFAP44Q96MT7 AC097381.1-201ENST00000429019 1296 ntBASIC28.29■■■□□ 2.12
CFAP44Q96MT7 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC28.29■■■□□ 2.12
CFAP44Q96MT7 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC28.29■■■□□ 2.12
CFAP44Q96MT7 MIR6821-201ENST00000617625 74 ntBASIC28.29■■■□□ 2.12
CFAP44Q96MT7 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC28.29■■■□□ 2.12
CFAP44Q96MT7 MIR6084-201ENST00000622012 110 ntBASIC28.29■■■□□ 2.12
CFAP44Q96MT7 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
CFAP44Q96MT7 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
CFAP44Q96MT7 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
CFAP44Q96MT7 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC28.28■■■□□ 2.12
CFAP44Q96MT7 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC28.28■■■□□ 2.12
CFAP44Q96MT7 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
CFAP44Q96MT7 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC28.28■■■□□ 2.12
CFAP44Q96MT7 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC28.28■■■□□ 2.12
CFAP44Q96MT7 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
CFAP44Q96MT7 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
CFAP44Q96MT7 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC28.27■■■□□ 2.12
CFAP44Q96MT7 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC28.27■■■□□ 2.12
CFAP44Q96MT7 AC079089.2-201ENST00000531211 1277 ntBASIC28.27■■■□□ 2.12
CFAP44Q96MT7 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC28.27■■■□□ 2.12
CFAP44Q96MT7 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC28.27■■■□□ 2.12
CFAP44Q96MT7 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
CFAP44Q96MT7 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC28.27■■■□□ 2.12
CFAP44Q96MT7 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC28.27■■■□□ 2.12
CFAP44Q96MT7 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
CFAP44Q96MT7 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC28.27■■■□□ 2.12
CFAP44Q96MT7 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
CFAP44Q96MT7 AC012676.1-201ENST00000574705 1949 ntBASIC28.26■■■□□ 2.11
CFAP44Q96MT7 AC137767.1-201ENST00000602918 1920 ntBASIC28.26■■■□□ 2.11
CFAP44Q96MT7 MPST-204ENST00000404393 1329 ntTSL 5 BASIC28.26■■■□□ 2.11
CFAP44Q96MT7 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC28.26■■■□□ 2.11
CFAP44Q96MT7 PARL-206ENST00000435888 1098 ntTSL 5 BASIC28.26■■■□□ 2.11
CFAP44Q96MT7 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
CFAP44Q96MT7 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC28.26■■■□□ 2.11
CFAP44Q96MT7 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
CFAP44Q96MT7 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
CFAP44Q96MT7 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC28.26■■■□□ 2.11
CFAP44Q96MT7 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC28.26■■■□□ 2.11
CFAP44Q96MT7 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
CFAP44Q96MT7 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC28.25■■■□□ 2.11
CFAP44Q96MT7 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
CFAP44Q96MT7 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
CFAP44Q96MT7 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC28.25■■■□□ 2.11
CFAP44Q96MT7 MFF-208ENST00000409616 1247 ntTSL 5 BASIC28.25■■■□□ 2.11
CFAP44Q96MT7 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
CFAP44Q96MT7 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
CFAP44Q96MT7 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC28.24■■■□□ 2.11
CFAP44Q96MT7 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC28.24■■■□□ 2.11
CFAP44Q96MT7 YBX1P1-201ENST00000445822 960 ntBASIC28.24■■■□□ 2.11
CFAP44Q96MT7 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC28.24■■■□□ 2.11
CFAP44Q96MT7 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC28.24■■■□□ 2.11
CFAP44Q96MT7 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC28.24■■■□□ 2.11
CFAP44Q96MT7 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC28.24■■■□□ 2.11
CFAP44Q96MT7 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
CFAP44Q96MT7 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
CFAP44Q96MT7 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
CFAP44Q96MT7 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC28.23■■■□□ 2.11
CFAP44Q96MT7 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
CFAP44Q96MT7 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC28.23■■■□□ 2.11
CFAP44Q96MT7 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
CFAP44Q96MT7 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
CFAP44Q96MT7 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
CFAP44Q96MT7 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
CFAP44Q96MT7 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
CFAP44Q96MT7 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
CFAP44Q96MT7 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC28.22■■■□□ 2.11
CFAP44Q96MT7 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
CFAP44Q96MT7 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
CFAP44Q96MT7 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
CFAP44Q96MT7 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC28.22■■■□□ 2.11
CFAP44Q96MT7 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
CFAP44Q96MT7 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC28.22■■■□□ 2.11
CFAP44Q96MT7 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
CFAP44Q96MT7 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC28.22■■■□□ 2.11
CFAP44Q96MT7 ESRRAP2-201ENST00000418437 1549 ntBASIC28.22■■■□□ 2.11
CFAP44Q96MT7 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
CFAP44Q96MT7 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
CFAP44Q96MT7 LINC00526-201ENST00000581067 1875 ntBASIC28.21■■■□□ 2.11
CFAP44Q96MT7 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
CFAP44Q96MT7 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC28.21■■■□□ 2.11
CFAP44Q96MT7 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
CFAP44Q96MT7 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
CFAP44Q96MT7 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
CFAP44Q96MT7 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
CFAP44Q96MT7 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
CFAP44Q96MT7 AC123595.1-201ENST00000440769 1046 ntBASIC28.21■■■□□ 2.11
CFAP44Q96MT7 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC28.21■■■□□ 2.11
CFAP44Q96MT7 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC28.21■■■□□ 2.11
CFAP44Q96MT7 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC28.2■■■□□ 2.11
CFAP44Q96MT7 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC28.2■■■□□ 2.11
CFAP44Q96MT7 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC28.2■■■□□ 2.1
CFAP44Q96MT7 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
CFAP44Q96MT7 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
CFAP44Q96MT7 PLD4-205ENST00000553861 667 ntTSL 2 BASIC28.2■■■□□ 2.1
CFAP44Q96MT7 AC087623.3-201ENST00000607047 1098 ntBASIC28.2■■■□□ 2.1
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms