Protein–RNA interactions for Protein: Q8NAE3

LINC01555, Putative uncharacterized protein encoded by LINC01555, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01555Q8NAE3 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
LINC01555Q8NAE3 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
LINC01555Q8NAE3 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LINC01555Q8NAE3 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
LINC01555Q8NAE3 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LINC01555Q8NAE3 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LINC01555Q8NAE3 AC127496.7-201ENST00000625110 1798 ntBASIC21.01■□□□□ 0.95
LINC01555Q8NAE3 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
LINC01555Q8NAE3 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LINC01555Q8NAE3 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC21.01■□□□□ 0.95
LINC01555Q8NAE3 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC21.01■□□□□ 0.95
LINC01555Q8NAE3 AC079089.2-201ENST00000531211 1277 ntBASIC21.01■□□□□ 0.95
LINC01555Q8NAE3 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC21.01■□□□□ 0.95
LINC01555Q8NAE3 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC21.01■□□□□ 0.95
LINC01555Q8NAE3 AC105233.4-201ENST00000642045 216 ntBASIC21.01■□□□□ 0.95
LINC01555Q8NAE3 LTK-203ENST00000453182 2412 ntTSL 2 BASIC21.01■□□□□ 0.95
LINC01555Q8NAE3 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC21.01■□□□□ 0.95
LINC01555Q8NAE3 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LINC01555Q8NAE3 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
LINC01555Q8NAE3 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LINC01555Q8NAE3 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
LINC01555Q8NAE3 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LINC01555Q8NAE3 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC21■□□□□ 0.95
LINC01555Q8NAE3 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC21■□□□□ 0.95
LINC01555Q8NAE3 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
LINC01555Q8NAE3 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC21■□□□□ 0.95
LINC01555Q8NAE3 AC080038.3-201ENST00000623346 1952 ntBASIC21■□□□□ 0.95
LINC01555Q8NAE3 JTB-203ENST00000368589 1216 ntTSL 2 BASIC21■□□□□ 0.95
LINC01555Q8NAE3 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC21■□□□□ 0.95
LINC01555Q8NAE3 SMUG1P1-201ENST00000590640 811 ntBASIC21■□□□□ 0.95
LINC01555Q8NAE3 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC21■□□□□ 0.95
LINC01555Q8NAE3 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
LINC01555Q8NAE3 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
LINC01555Q8NAE3 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC21■□□□□ 0.95
LINC01555Q8NAE3 LINC00526-201ENST00000581067 1875 ntBASIC21■□□□□ 0.95
LINC01555Q8NAE3 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC21■□□□□ 0.95
LINC01555Q8NAE3 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
LINC01555Q8NAE3 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
LINC01555Q8NAE3 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.99■□□□□ 0.95
LINC01555Q8NAE3 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20.99■□□□□ 0.95
LINC01555Q8NAE3 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LINC01555Q8NAE3 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC20.99■□□□□ 0.95
LINC01555Q8NAE3 AC012414.1-201ENST00000556676 535 ntBASIC20.99■□□□□ 0.95
LINC01555Q8NAE3 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LINC01555Q8NAE3 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LINC01555Q8NAE3 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
LINC01555Q8NAE3 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.98■□□□□ 0.95
LINC01555Q8NAE3 AC233723.2-201ENST00000623798 2106 ntBASIC20.98■□□□□ 0.95
LINC01555Q8NAE3 AC139530.1-201ENST00000575312 1977 ntBASIC20.98■□□□□ 0.95
LINC01555Q8NAE3 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
LINC01555Q8NAE3 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC20.98■□□□□ 0.95
LINC01555Q8NAE3 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC20.98■□□□□ 0.95
LINC01555Q8NAE3 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC20.98■□□□□ 0.95
LINC01555Q8NAE3 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
LINC01555Q8NAE3 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC20.98■□□□□ 0.95
LINC01555Q8NAE3 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LINC01555Q8NAE3 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
LINC01555Q8NAE3 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LINC01555Q8NAE3 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20.98■□□□□ 0.95
LINC01555Q8NAE3 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.98■□□□□ 0.95
LINC01555Q8NAE3 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LINC01555Q8NAE3 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
LINC01555Q8NAE3 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LINC01555Q8NAE3 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
LINC01555Q8NAE3 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
LINC01555Q8NAE3 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC20.97■□□□□ 0.95
LINC01555Q8NAE3 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LINC01555Q8NAE3 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC20.97■□□□□ 0.95
LINC01555Q8NAE3 MIR6084-201ENST00000622012 110 ntBASIC20.97■□□□□ 0.95
LINC01555Q8NAE3 AL358852.1-201ENST00000623174 1268 ntBASIC20.97■□□□□ 0.95
LINC01555Q8NAE3 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
LINC01555Q8NAE3 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.97■□□□□ 0.95
LINC01555Q8NAE3 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
LINC01555Q8NAE3 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
LINC01555Q8NAE3 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LINC01555Q8NAE3 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LINC01555Q8NAE3 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
LINC01555Q8NAE3 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
LINC01555Q8NAE3 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
LINC01555Q8NAE3 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
LINC01555Q8NAE3 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LINC01555Q8NAE3 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC20.96■□□□□ 0.95
LINC01555Q8NAE3 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LINC01555Q8NAE3 NME4-202ENST00000382940 766 ntTSL 3 BASIC20.96■□□□□ 0.95
LINC01555Q8NAE3 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC20.96■□□□□ 0.95
LINC01555Q8NAE3 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC20.96■□□□□ 0.95
LINC01555Q8NAE3 AL354811.1-201ENST00000610286 706 ntBASIC20.96■□□□□ 0.95
LINC01555Q8NAE3 NME4-211ENST00000620944 1193 ntTSL 2 BASIC20.96■□□□□ 0.95
LINC01555Q8NAE3 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LINC01555Q8NAE3 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LINC01555Q8NAE3 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC20.95■□□□□ 0.94
LINC01555Q8NAE3 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.95■□□□□ 0.94
LINC01555Q8NAE3 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC20.95■□□□□ 0.94
LINC01555Q8NAE3 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LINC01555Q8NAE3 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LINC01555Q8NAE3 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
LINC01555Q8NAE3 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
LINC01555Q8NAE3 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
LINC01555Q8NAE3 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LINC01555Q8NAE3 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms