Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TTC9CQ8N5M4 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC17.17■□□□□ 0.34
TTC9CQ8N5M4 EP400NL-214ENST00000641289 2402 ntBASIC17.17■□□□□ 0.34
TTC9CQ8N5M4 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TTC9CQ8N5M4 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TTC9CQ8N5M4 AC092053.2-201ENST00000640557 1818 ntBASIC17.17■□□□□ 0.34
TTC9CQ8N5M4 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
TTC9CQ8N5M4 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC17.16■□□□□ 0.34
TTC9CQ8N5M4 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TTC9CQ8N5M4 AC008406.3-201ENST00000620001 1374 ntBASIC17.16■□□□□ 0.34
TTC9CQ8N5M4 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
TTC9CQ8N5M4 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TTC9CQ8N5M4 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TTC9CQ8N5M4 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC17.16■□□□□ 0.34
TTC9CQ8N5M4 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TTC9CQ8N5M4 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
TTC9CQ8N5M4 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TTC9CQ8N5M4 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TTC9CQ8N5M4 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
TTC9CQ8N5M4 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC17.16■□□□□ 0.34
TTC9CQ8N5M4 EI24-211ENST00000534546 1544 ntTSL 2 BASIC17.16■□□□□ 0.34
TTC9CQ8N5M4 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC17.16■□□□□ 0.34
TTC9CQ8N5M4 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TTC9CQ8N5M4 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC17.15■□□□□ 0.34
TTC9CQ8N5M4 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TTC9CQ8N5M4 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
TTC9CQ8N5M4 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC17.15■□□□□ 0.34
TTC9CQ8N5M4 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TTC9CQ8N5M4 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TTC9CQ8N5M4 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TTC9CQ8N5M4 RBM38-205ENST00000440234 686 ntTSL 2 BASIC17.15■□□□□ 0.34
TTC9CQ8N5M4 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
TTC9CQ8N5M4 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
TTC9CQ8N5M4 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
TTC9CQ8N5M4 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TTC9CQ8N5M4 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TTC9CQ8N5M4 CLDN5-201ENST00000403084 2357 ntBASIC17.15■□□□□ 0.34
TTC9CQ8N5M4 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC17.15■□□□□ 0.34
TTC9CQ8N5M4 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TTC9CQ8N5M4 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TTC9CQ8N5M4 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TTC9CQ8N5M4 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TTC9CQ8N5M4 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC17.14■□□□□ 0.34
TTC9CQ8N5M4 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.34
TTC9CQ8N5M4 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TTC9CQ8N5M4 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
TTC9CQ8N5M4 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC17.14■□□□□ 0.33
TTC9CQ8N5M4 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC17.14■□□□□ 0.33
TTC9CQ8N5M4 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
TTC9CQ8N5M4 UNC93B3-201ENST00000308076 687 ntBASIC17.14■□□□□ 0.33
TTC9CQ8N5M4 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TTC9CQ8N5M4 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TTC9CQ8N5M4 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC17.14■□□□□ 0.33
TTC9CQ8N5M4 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TTC9CQ8N5M4 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC17.14■□□□□ 0.33
TTC9CQ8N5M4 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TTC9CQ8N5M4 AC087239.1-201ENST00000622671 572 ntBASIC17.14■□□□□ 0.33
TTC9CQ8N5M4 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TTC9CQ8N5M4 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TTC9CQ8N5M4 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TTC9CQ8N5M4 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC17.13■□□□□ 0.33
TTC9CQ8N5M4 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC17.13■□□□□ 0.33
TTC9CQ8N5M4 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
TTC9CQ8N5M4 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TTC9CQ8N5M4 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TTC9CQ8N5M4 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC17.13■□□□□ 0.33
TTC9CQ8N5M4 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TTC9CQ8N5M4 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
TTC9CQ8N5M4 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
TTC9CQ8N5M4 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
TTC9CQ8N5M4 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TTC9CQ8N5M4 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TTC9CQ8N5M4 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TTC9CQ8N5M4 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC17.13■□□□□ 0.33
TTC9CQ8N5M4 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC17.13■□□□□ 0.33
TTC9CQ8N5M4 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TTC9CQ8N5M4 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TTC9CQ8N5M4 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TTC9CQ8N5M4 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TTC9CQ8N5M4 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC17.13■□□□□ 0.33
TTC9CQ8N5M4 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TTC9CQ8N5M4 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TTC9CQ8N5M4 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TTC9CQ8N5M4 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TTC9CQ8N5M4 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC17.12■□□□□ 0.33
TTC9CQ8N5M4 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TTC9CQ8N5M4 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TTC9CQ8N5M4 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
TTC9CQ8N5M4 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC17.12■□□□□ 0.33
TTC9CQ8N5M4 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TTC9CQ8N5M4 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
TTC9CQ8N5M4 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TTC9CQ8N5M4 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC17.12■□□□□ 0.33
TTC9CQ8N5M4 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TTC9CQ8N5M4 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TTC9CQ8N5M4 PEMT-206ENST00000435340 960 ntTSL 5 BASIC17.12■□□□□ 0.33
TTC9CQ8N5M4 AC079089.2-201ENST00000531211 1277 ntBASIC17.12■□□□□ 0.33
TTC9CQ8N5M4 AC010525.1-201ENST00000585559 441 ntBASIC17.12■□□□□ 0.33
TTC9CQ8N5M4 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC17.12■□□□□ 0.33
TTC9CQ8N5M4 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms