Protein–RNA interactions for Protein: Q2M2E3

ODF4, Outer dense fiber protein 4, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ODF4Q2M2E3 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC19.18■□□□□ 0.66
ODF4Q2M2E3 MTDHP2-201ENST00000601468 714 ntBASIC19.18■□□□□ 0.66
ODF4Q2M2E3 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
ODF4Q2M2E3 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ODF4Q2M2E3 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ODF4Q2M2E3 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC19.18■□□□□ 0.66
ODF4Q2M2E3 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
ODF4Q2M2E3 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.18■□□□□ 0.66
ODF4Q2M2E3 AC009102.2-201ENST00000606772 1639 ntBASIC19.18■□□□□ 0.66
ODF4Q2M2E3 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ODF4Q2M2E3 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
ODF4Q2M2E3 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ODF4Q2M2E3 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
ODF4Q2M2E3 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
ODF4Q2M2E3 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
ODF4Q2M2E3 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ODF4Q2M2E3 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
ODF4Q2M2E3 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ODF4Q2M2E3 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
ODF4Q2M2E3 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ODF4Q2M2E3 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.17■□□□□ 0.66
ODF4Q2M2E3 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC19.17■□□□□ 0.66
ODF4Q2M2E3 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ODF4Q2M2E3 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.17■□□□□ 0.66
ODF4Q2M2E3 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ODF4Q2M2E3 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
ODF4Q2M2E3 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ODF4Q2M2E3 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
ODF4Q2M2E3 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
ODF4Q2M2E3 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ODF4Q2M2E3 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.16■□□□□ 0.66
ODF4Q2M2E3 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.16■□□□□ 0.66
ODF4Q2M2E3 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC19.16■□□□□ 0.66
ODF4Q2M2E3 HES6-204ENST00000409182 863 ntTSL 2 BASIC19.16■□□□□ 0.66
ODF4Q2M2E3 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC19.16■□□□□ 0.66
ODF4Q2M2E3 DUX4L4-201ENST00000566884 1269 ntBASIC19.16■□□□□ 0.66
ODF4Q2M2E3 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC19.16■□□□□ 0.66
ODF4Q2M2E3 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ODF4Q2M2E3 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
ODF4Q2M2E3 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
ODF4Q2M2E3 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
ODF4Q2M2E3 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ODF4Q2M2E3 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC19.15■□□□□ 0.66
ODF4Q2M2E3 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ODF4Q2M2E3 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ODF4Q2M2E3 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ODF4Q2M2E3 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC19.15■□□□□ 0.66
ODF4Q2M2E3 CD72-202ENST00000378430 585 ntTSL 3 BASIC19.15■□□□□ 0.66
ODF4Q2M2E3 TSPY9P-201ENST00000440215 945 ntBASIC19.15■□□□□ 0.66
ODF4Q2M2E3 TSPY11P-201ENST00000442607 1045 ntBASIC19.15■□□□□ 0.66
ODF4Q2M2E3 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC19.15■□□□□ 0.66
ODF4Q2M2E3 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ODF4Q2M2E3 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ODF4Q2M2E3 MIR4787-201ENST00000607364 84 ntBASIC19.15■□□□□ 0.66
ODF4Q2M2E3 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC19.15■□□□□ 0.66
ODF4Q2M2E3 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ODF4Q2M2E3 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ODF4Q2M2E3 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ODF4Q2M2E3 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
ODF4Q2M2E3 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
ODF4Q2M2E3 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
ODF4Q2M2E3 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ODF4Q2M2E3 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
ODF4Q2M2E3 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
ODF4Q2M2E3 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ODF4Q2M2E3 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
ODF4Q2M2E3 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.15■□□□□ 0.66
ODF4Q2M2E3 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.15■□□□□ 0.66
ODF4Q2M2E3 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ODF4Q2M2E3 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ODF4Q2M2E3 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
ODF4Q2M2E3 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
ODF4Q2M2E3 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ODF4Q2M2E3 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
ODF4Q2M2E3 FAM99A-202ENST00000538190 1989 ntBASIC19.14■□□□□ 0.65
ODF4Q2M2E3 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
ODF4Q2M2E3 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
ODF4Q2M2E3 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
ODF4Q2M2E3 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
ODF4Q2M2E3 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ODF4Q2M2E3 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
ODF4Q2M2E3 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ODF4Q2M2E3 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ODF4Q2M2E3 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ODF4Q2M2E3 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC19.14■□□□□ 0.65
ODF4Q2M2E3 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ODF4Q2M2E3 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
ODF4Q2M2E3 AC239859.2-201ENST00000444165 318 ntBASIC19.13■□□□□ 0.65
ODF4Q2M2E3 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC19.13■□□□□ 0.65
ODF4Q2M2E3 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
ODF4Q2M2E3 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ODF4Q2M2E3 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
ODF4Q2M2E3 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC19.13■□□□□ 0.65
ODF4Q2M2E3 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
ODF4Q2M2E3 AC010542.4-201ENST00000563151 1910 ntBASIC19.13■□□□□ 0.65
ODF4Q2M2E3 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.13■□□□□ 0.65
ODF4Q2M2E3 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.12■□□□□ 0.65
ODF4Q2M2E3 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.12■□□□□ 0.65
ODF4Q2M2E3 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ODF4Q2M2E3 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms