Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
RCCD1A6NED2 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
RCCD1A6NED2 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
RCCD1A6NED2 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
RCCD1A6NED2 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
RCCD1A6NED2 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
RCCD1A6NED2 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
RCCD1A6NED2 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC23.19■■□□□ 1.3
RCCD1A6NED2 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC23.19■■□□□ 1.3
RCCD1A6NED2 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
RCCD1A6NED2 AF106564.1-201ENST00000607058 2553 ntBASIC23.19■■□□□ 1.3
RCCD1A6NED2 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC23.19■■□□□ 1.3
RCCD1A6NED2 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
RCCD1A6NED2 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC23.18■■□□□ 1.3
RCCD1A6NED2 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
RCCD1A6NED2 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
RCCD1A6NED2 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC23.18■■□□□ 1.3
RCCD1A6NED2 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
RCCD1A6NED2 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
RCCD1A6NED2 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
RCCD1A6NED2 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
RCCD1A6NED2 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC23.18■■□□□ 1.3
RCCD1A6NED2 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC23.18■■□□□ 1.3
RCCD1A6NED2 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
RCCD1A6NED2 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
RCCD1A6NED2 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC23.18■■□□□ 1.3
RCCD1A6NED2 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
RCCD1A6NED2 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC23.18■■□□□ 1.3
RCCD1A6NED2 VGF-203ENST00000611537 1622 ntTSL 5 BASIC23.18■■□□□ 1.3
RCCD1A6NED2 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
RCCD1A6NED2 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC23.18■■□□□ 1.3
RCCD1A6NED2 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
RCCD1A6NED2 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
RCCD1A6NED2 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
RCCD1A6NED2 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
RCCD1A6NED2 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC23.17■■□□□ 1.3
RCCD1A6NED2 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC23.17■■□□□ 1.3
RCCD1A6NED2 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RCCD1A6NED2 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
RCCD1A6NED2 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
RCCD1A6NED2 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RCCD1A6NED2 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RCCD1A6NED2 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
RCCD1A6NED2 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
RCCD1A6NED2 CD72-202ENST00000378430 585 ntTSL 3 BASIC23.16■■□□□ 1.3
RCCD1A6NED2 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC23.16■■□□□ 1.3
RCCD1A6NED2 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RCCD1A6NED2 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RCCD1A6NED2 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
RCCD1A6NED2 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC23.16■■□□□ 1.3
RCCD1A6NED2 AC026471.6-201ENST00000622954 1905 ntBASIC23.16■■□□□ 1.3
RCCD1A6NED2 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
RCCD1A6NED2 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC23.15■■□□□ 1.3
RCCD1A6NED2 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
RCCD1A6NED2 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
RCCD1A6NED2 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
RCCD1A6NED2 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC23.15■■□□□ 1.3
RCCD1A6NED2 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC23.15■■□□□ 1.3
RCCD1A6NED2 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
RCCD1A6NED2 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC23.15■■□□□ 1.3
RCCD1A6NED2 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC23.15■■□□□ 1.3
RCCD1A6NED2 Z98882.1-201ENST00000622160 2253 ntBASIC23.15■■□□□ 1.3
RCCD1A6NED2 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC23.15■■□□□ 1.3
RCCD1A6NED2 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
RCCD1A6NED2 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
RCCD1A6NED2 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC23.14■■□□□ 1.3
RCCD1A6NED2 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
RCCD1A6NED2 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC23.14■■□□□ 1.3
RCCD1A6NED2 SLC25A24-204ENST00000569674 2357 ntBASIC23.14■■□□□ 1.3
RCCD1A6NED2 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.29
RCCD1A6NED2 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.29
RCCD1A6NED2 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.29
RCCD1A6NED2 RNF146-205ENST00000477776 762 ntTSL 3 BASIC23.14■■□□□ 1.29
RCCD1A6NED2 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC23.14■■□□□ 1.29
RCCD1A6NED2 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
RCCD1A6NED2 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.29
RCCD1A6NED2 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
RCCD1A6NED2 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC23.14■■□□□ 1.29
RCCD1A6NED2 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.29
RCCD1A6NED2 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
RCCD1A6NED2 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC23.14■■□□□ 1.29
RCCD1A6NED2 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC23.14■■□□□ 1.29
RCCD1A6NED2 MED17-221ENST00000639724 2317 ntTSL 5 BASIC23.14■■□□□ 1.29
RCCD1A6NED2 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
RCCD1A6NED2 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
RCCD1A6NED2 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
RCCD1A6NED2 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
RCCD1A6NED2 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC23.13■■□□□ 1.29
RCCD1A6NED2 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
RCCD1A6NED2 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
RCCD1A6NED2 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC23.13■■□□□ 1.29
RCCD1A6NED2 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
RCCD1A6NED2 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC23.12■■□□□ 1.29
RCCD1A6NED2 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
RCCD1A6NED2 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
RCCD1A6NED2 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC23.12■■□□□ 1.29
RCCD1A6NED2 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
RCCD1A6NED2 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
RCCD1A6NED2 AL499627.2-201ENST00000606283 725 ntBASIC23.12■■□□□ 1.29
RCCD1A6NED2 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms