Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRBV5-3A0A0A0MS03 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.47■□□□□ 0.87
TRBV5-3A0A0A0MS03 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRBV5-3A0A0A0MS03 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.47■□□□□ 0.87
TRBV5-3A0A0A0MS03 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.47■□□□□ 0.87
TRBV5-3A0A0A0MS03 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRBV5-3A0A0A0MS03 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRBV5-3A0A0A0MS03 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TRBV5-3A0A0A0MS03 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC20.46■□□□□ 0.87
TRBV5-3A0A0A0MS03 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRBV5-3A0A0A0MS03 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.46■□□□□ 0.87
TRBV5-3A0A0A0MS03 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.46■□□□□ 0.87
TRBV5-3A0A0A0MS03 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRBV5-3A0A0A0MS03 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRBV5-3A0A0A0MS03 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRBV5-3A0A0A0MS03 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRBV5-3A0A0A0MS03 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.45■□□□□ 0.86
TRBV5-3A0A0A0MS03 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TRBV5-3A0A0A0MS03 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.45■□□□□ 0.86
TRBV5-3A0A0A0MS03 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC20.45■□□□□ 0.86
TRBV5-3A0A0A0MS03 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRBV5-3A0A0A0MS03 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRBV5-3A0A0A0MS03 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC20.45■□□□□ 0.86
TRBV5-3A0A0A0MS03 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
TRBV5-3A0A0A0MS03 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
TRBV5-3A0A0A0MS03 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
TRBV5-3A0A0A0MS03 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TRBV5-3A0A0A0MS03 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRBV5-3A0A0A0MS03 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
TRBV5-3A0A0A0MS03 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRBV5-3A0A0A0MS03 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC20.43■□□□□ 0.86
TRBV5-3A0A0A0MS03 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRBV5-3A0A0A0MS03 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRBV5-3A0A0A0MS03 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRBV5-3A0A0A0MS03 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
TRBV5-3A0A0A0MS03 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRBV5-3A0A0A0MS03 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRBV5-3A0A0A0MS03 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRBV5-3A0A0A0MS03 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TRBV5-3A0A0A0MS03 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRBV5-3A0A0A0MS03 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
TRBV5-3A0A0A0MS03 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC20.43■□□□□ 0.86
TRBV5-3A0A0A0MS03 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRBV5-3A0A0A0MS03 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRBV5-3A0A0A0MS03 Z98882.1-201ENST00000622160 2253 ntBASIC20.42■□□□□ 0.86
TRBV5-3A0A0A0MS03 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRBV5-3A0A0A0MS03 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.42■□□□□ 0.86
TRBV5-3A0A0A0MS03 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRBV5-3A0A0A0MS03 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TRBV5-3A0A0A0MS03 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
TRBV5-3A0A0A0MS03 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC20.42■□□□□ 0.86
TRBV5-3A0A0A0MS03 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TRBV5-3A0A0A0MS03 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC20.42■□□□□ 0.86
TRBV5-3A0A0A0MS03 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
TRBV5-3A0A0A0MS03 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC20.42■□□□□ 0.86
TRBV5-3A0A0A0MS03 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.42■□□□□ 0.86
TRBV5-3A0A0A0MS03 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TRBV5-3A0A0A0MS03 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRBV5-3A0A0A0MS03 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRBV5-3A0A0A0MS03 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRBV5-3A0A0A0MS03 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TRBV5-3A0A0A0MS03 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
TRBV5-3A0A0A0MS03 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRBV5-3A0A0A0MS03 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.41■□□□□ 0.86
TRBV5-3A0A0A0MS03 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRBV5-3A0A0A0MS03 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.41■□□□□ 0.86
TRBV5-3A0A0A0MS03 AC239859.2-201ENST00000444165 318 ntBASIC20.41■□□□□ 0.86
TRBV5-3A0A0A0MS03 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TRBV5-3A0A0A0MS03 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
TRBV5-3A0A0A0MS03 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC20.41■□□□□ 0.86
TRBV5-3A0A0A0MS03 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.41■□□□□ 0.86
TRBV5-3A0A0A0MS03 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TRBV5-3A0A0A0MS03 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRBV5-3A0A0A0MS03 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRBV5-3A0A0A0MS03 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRBV5-3A0A0A0MS03 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
TRBV5-3A0A0A0MS03 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRBV5-3A0A0A0MS03 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.4■□□□□ 0.86
TRBV5-3A0A0A0MS03 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRBV5-3A0A0A0MS03 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRBV5-3A0A0A0MS03 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TRBV5-3A0A0A0MS03 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRBV5-3A0A0A0MS03 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.4■□□□□ 0.86
TRBV5-3A0A0A0MS03 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.4■□□□□ 0.86
TRBV5-3A0A0A0MS03 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
TRBV5-3A0A0A0MS03 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
TRBV5-3A0A0A0MS03 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
TRBV5-3A0A0A0MS03 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
TRBV5-3A0A0A0MS03 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
TRBV5-3A0A0A0MS03 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
TRBV5-3A0A0A0MS03 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
TRBV5-3A0A0A0MS03 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.39■□□□□ 0.85
TRBV5-3A0A0A0MS03 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRBV5-3A0A0A0MS03 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRBV5-3A0A0A0MS03 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRBV5-3A0A0A0MS03 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC20.39■□□□□ 0.85
TRBV5-3A0A0A0MS03 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRBV5-3A0A0A0MS03 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
TRBV5-3A0A0A0MS03 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TRBV5-3A0A0A0MS03 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms