Protein–RNA interactions for Protein: Q9Y5I0

PCDHA13, Protocadherin alpha-13, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13Q9Y5I0 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
PCDHA13Q9Y5I0 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
PCDHA13Q9Y5I0 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PCDHA13Q9Y5I0 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
PCDHA13Q9Y5I0 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
PCDHA13Q9Y5I0 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
PCDHA13Q9Y5I0 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
PCDHA13Q9Y5I0 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC23.33■■□□□ 1.32
PCDHA13Q9Y5I0 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC23.32■■□□□ 1.32
PCDHA13Q9Y5I0 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC23.32■■□□□ 1.32
PCDHA13Q9Y5I0 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
PCDHA13Q9Y5I0 AC092028.1-203ENST00000608262 953 ntBASIC23.32■■□□□ 1.32
PCDHA13Q9Y5I0 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PCDHA13Q9Y5I0 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC23.32■■□□□ 1.32
PCDHA13Q9Y5I0 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PCDHA13Q9Y5I0 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
PCDHA13Q9Y5I0 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
PCDHA13Q9Y5I0 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
PCDHA13Q9Y5I0 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PCDHA13Q9Y5I0 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
PCDHA13Q9Y5I0 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC23.31■■□□□ 1.32
PCDHA13Q9Y5I0 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PCDHA13Q9Y5I0 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
PCDHA13Q9Y5I0 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
PCDHA13Q9Y5I0 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC23.31■■□□□ 1.32
PCDHA13Q9Y5I0 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PCDHA13Q9Y5I0 PRTG-204ENST00000561292 833 ntTSL 3 BASIC23.31■■□□□ 1.32
PCDHA13Q9Y5I0 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PCDHA13Q9Y5I0 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PCDHA13Q9Y5I0 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC23.3■■□□□ 1.32
PCDHA13Q9Y5I0 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PCDHA13Q9Y5I0 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PCDHA13Q9Y5I0 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC23.3■■□□□ 1.32
PCDHA13Q9Y5I0 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC23.3■■□□□ 1.32
PCDHA13Q9Y5I0 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC23.3■■□□□ 1.32
PCDHA13Q9Y5I0 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
PCDHA13Q9Y5I0 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC23.3■■□□□ 1.32
PCDHA13Q9Y5I0 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PCDHA13Q9Y5I0 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
PCDHA13Q9Y5I0 PALM-208ENST00000592155 2272 ntTSL 4 BASIC23.3■■□□□ 1.32
PCDHA13Q9Y5I0 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
PCDHA13Q9Y5I0 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC23.3■■□□□ 1.32
PCDHA13Q9Y5I0 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
PCDHA13Q9Y5I0 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PCDHA13Q9Y5I0 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
PCDHA13Q9Y5I0 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC23.29■■□□□ 1.32
PCDHA13Q9Y5I0 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PCDHA13Q9Y5I0 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PCDHA13Q9Y5I0 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PCDHA13Q9Y5I0 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PCDHA13Q9Y5I0 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
PCDHA13Q9Y5I0 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
PCDHA13Q9Y5I0 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
PCDHA13Q9Y5I0 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
PCDHA13Q9Y5I0 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PCDHA13Q9Y5I0 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC23.29■■□□□ 1.32
PCDHA13Q9Y5I0 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PCDHA13Q9Y5I0 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PCDHA13Q9Y5I0 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PCDHA13Q9Y5I0 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PCDHA13Q9Y5I0 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PCDHA13Q9Y5I0 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PCDHA13Q9Y5I0 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PCDHA13Q9Y5I0 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PCDHA13Q9Y5I0 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
PCDHA13Q9Y5I0 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PCDHA13Q9Y5I0 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC23.28■■□□□ 1.32
PCDHA13Q9Y5I0 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PCDHA13Q9Y5I0 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
PCDHA13Q9Y5I0 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
PCDHA13Q9Y5I0 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC23.28■■□□□ 1.32
PCDHA13Q9Y5I0 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC23.28■■□□□ 1.32
PCDHA13Q9Y5I0 AC244015.2-201ENST00000616358 1861 ntBASIC23.28■■□□□ 1.32
PCDHA13Q9Y5I0 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC23.28■■□□□ 1.32
PCDHA13Q9Y5I0 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
PCDHA13Q9Y5I0 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PCDHA13Q9Y5I0 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC23.27■■□□□ 1.32
PCDHA13Q9Y5I0 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
PCDHA13Q9Y5I0 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
PCDHA13Q9Y5I0 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC23.27■■□□□ 1.32
PCDHA13Q9Y5I0 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC23.27■■□□□ 1.32
PCDHA13Q9Y5I0 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
PCDHA13Q9Y5I0 C17orf82-201ENST00000623772 1530 ntBASIC23.27■■□□□ 1.32
PCDHA13Q9Y5I0 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.32
PCDHA13Q9Y5I0 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
PCDHA13Q9Y5I0 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC23.26■■□□□ 1.31
PCDHA13Q9Y5I0 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
PCDHA13Q9Y5I0 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
PCDHA13Q9Y5I0 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
PCDHA13Q9Y5I0 AC005229.4-201ENST00000610085 2198 ntBASIC23.26■■□□□ 1.31
PCDHA13Q9Y5I0 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
PCDHA13Q9Y5I0 HES6-204ENST00000409182 863 ntTSL 2 BASIC23.26■■□□□ 1.31
PCDHA13Q9Y5I0 RNF146-205ENST00000477776 762 ntTSL 3 BASIC23.26■■□□□ 1.31
PCDHA13Q9Y5I0 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC23.26■■□□□ 1.31
PCDHA13Q9Y5I0 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
PCDHA13Q9Y5I0 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
PCDHA13Q9Y5I0 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC23.26■■□□□ 1.31
PCDHA13Q9Y5I0 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC23.25■■□□□ 1.31
PCDHA13Q9Y5I0 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC23.25■■□□□ 1.31
PCDHA13Q9Y5I0 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms