Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC19.04■□□□□ 0.64
CDH20Q9HBT6 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.04■□□□□ 0.64
CDH20Q9HBT6 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CDH20Q9HBT6 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC19.03■□□□□ 0.64
CDH20Q9HBT6 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.03■□□□□ 0.64
CDH20Q9HBT6 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC19.03■□□□□ 0.64
CDH20Q9HBT6 MIR638-201ENST00000385237 100 ntBASIC19.03■□□□□ 0.64
CDH20Q9HBT6 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
CDH20Q9HBT6 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC19.03■□□□□ 0.64
CDH20Q9HBT6 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC19.03■□□□□ 0.64
CDH20Q9HBT6 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC19.03■□□□□ 0.64
CDH20Q9HBT6 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
CDH20Q9HBT6 AF213884.3-201ENST00000563833 479 ntBASIC19.03■□□□□ 0.64
CDH20Q9HBT6 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CDH20Q9HBT6 AC126544.1-201ENST00000580842 1059 ntBASIC19.03■□□□□ 0.64
CDH20Q9HBT6 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC19.03■□□□□ 0.64
CDH20Q9HBT6 AC087239.1-201ENST00000622671 572 ntBASIC19.03■□□□□ 0.64
CDH20Q9HBT6 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CDH20Q9HBT6 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
CDH20Q9HBT6 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDH20Q9HBT6 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDH20Q9HBT6 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CDH20Q9HBT6 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CDH20Q9HBT6 ME2-208ENST00000638937 2471 ntTSL 5 BASIC19.02■□□□□ 0.64
CDH20Q9HBT6 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
CDH20Q9HBT6 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC19.02■□□□□ 0.64
CDH20Q9HBT6 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CDH20Q9HBT6 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CDH20Q9HBT6 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CDH20Q9HBT6 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CDH20Q9HBT6 RBM38-205ENST00000440234 686 ntTSL 2 BASIC19.02■□□□□ 0.64
CDH20Q9HBT6 AP001330.3-201ENST00000520123 633 ntBASIC19.02■□□□□ 0.64
CDH20Q9HBT6 AC005837.3-201ENST00000612163 286 ntBASIC19.02■□□□□ 0.64
CDH20Q9HBT6 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC19.02■□□□□ 0.64
CDH20Q9HBT6 AC068587.7-201ENST00000641602 218 ntBASIC19.02■□□□□ 0.64
CDH20Q9HBT6 LINC01960-201ENST00000563759 1884 ntBASIC19.02■□□□□ 0.64
CDH20Q9HBT6 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CDH20Q9HBT6 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CDH20Q9HBT6 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CDH20Q9HBT6 AC068473.5-201ENST00000616428 2072 ntBASIC19.01■□□□□ 0.63
CDH20Q9HBT6 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CDH20Q9HBT6 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDH20Q9HBT6 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC19.01■□□□□ 0.63
CDH20Q9HBT6 AC099791.1-201ENST00000416440 715 ntBASIC19.01■□□□□ 0.63
CDH20Q9HBT6 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC19.01■□□□□ 0.63
CDH20Q9HBT6 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC19.01■□□□□ 0.63
CDH20Q9HBT6 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC19.01■□□□□ 0.63
CDH20Q9HBT6 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDH20Q9HBT6 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDH20Q9HBT6 C9orf163-202ENST00000624034 2573 ntBASIC19.01■□□□□ 0.63
CDH20Q9HBT6 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
CDH20Q9HBT6 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC19.01■□□□□ 0.63
CDH20Q9HBT6 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDH20Q9HBT6 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDH20Q9HBT6 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDH20Q9HBT6 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC19■□□□□ 0.63
CDH20Q9HBT6 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC19■□□□□ 0.63
CDH20Q9HBT6 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC19■□□□□ 0.63
CDH20Q9HBT6 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CDH20Q9HBT6 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC19■□□□□ 0.63
CDH20Q9HBT6 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC19■□□□□ 0.63
CDH20Q9HBT6 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19■□□□□ 0.63
CDH20Q9HBT6 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC19■□□□□ 0.63
CDH20Q9HBT6 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
CDH20Q9HBT6 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CDH20Q9HBT6 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CDH20Q9HBT6 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CDH20Q9HBT6 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
CDH20Q9HBT6 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
CDH20Q9HBT6 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC18.99■□□□□ 0.63
CDH20Q9HBT6 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CDH20Q9HBT6 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
CDH20Q9HBT6 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CDH20Q9HBT6 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
CDH20Q9HBT6 MIR939-201ENST00000401314 82 ntBASIC18.99■□□□□ 0.63
CDH20Q9HBT6 GRAMD4P2-201ENST00000423297 1097 ntBASIC18.99■□□□□ 0.63
CDH20Q9HBT6 AC091305.1-201ENST00000479476 895 ntBASIC18.99■□□□□ 0.63
CDH20Q9HBT6 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC18.99■□□□□ 0.63
CDH20Q9HBT6 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC18.99■□□□□ 0.63
CDH20Q9HBT6 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CDH20Q9HBT6 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
CDH20Q9HBT6 COMT-203ENST00000403184 2217 ntTSL 2 BASIC18.98■□□□□ 0.63
CDH20Q9HBT6 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
CDH20Q9HBT6 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
CDH20Q9HBT6 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDH20Q9HBT6 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC18.98■□□□□ 0.63
CDH20Q9HBT6 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
CDH20Q9HBT6 RASA4CP-201ENST00000424092 1398 ntBASIC18.98■□□□□ 0.63
CDH20Q9HBT6 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
CDH20Q9HBT6 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC18.98■□□□□ 0.63
CDH20Q9HBT6 MAG-206ENST00000597035 542 ntTSL 4 BASIC18.98■□□□□ 0.63
CDH20Q9HBT6 AL031432.3-201ENST00000607698 485 ntBASIC18.98■□□□□ 0.63
CDH20Q9HBT6 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CDH20Q9HBT6 EI24-211ENST00000534546 1544 ntTSL 2 BASIC18.98■□□□□ 0.63
CDH20Q9HBT6 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDH20Q9HBT6 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CDH20Q9HBT6 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
CDH20Q9HBT6 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC18.98■□□□□ 0.63
CDH20Q9HBT6 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDH20Q9HBT6 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms