Protein–RNA interactions for Protein: Q9H9S0

NANOG, Homeobox protein NANOG, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NANOGQ9H9S0 AL121603.2-201ENST00000557373 2117 ntBASIC20.69■□□□□ 0.9
NANOGQ9H9S0 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NANOGQ9H9S0 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NANOGQ9H9S0 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
NANOGQ9H9S0 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.68■□□□□ 0.9
NANOGQ9H9S0 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NANOGQ9H9S0 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC20.68■□□□□ 0.9
NANOGQ9H9S0 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC20.68■□□□□ 0.9
NANOGQ9H9S0 CLTA-210ENST00000540080 989 ntTSL 2 BASIC20.68■□□□□ 0.9
NANOGQ9H9S0 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC20.68■□□□□ 0.9
NANOGQ9H9S0 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC20.68■□□□□ 0.9
NANOGQ9H9S0 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
NANOGQ9H9S0 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
NANOGQ9H9S0 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
NANOGQ9H9S0 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
NANOGQ9H9S0 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
NANOGQ9H9S0 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
NANOGQ9H9S0 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
NANOGQ9H9S0 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
NANOGQ9H9S0 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NANOGQ9H9S0 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NANOGQ9H9S0 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NANOGQ9H9S0 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC20.67■□□□□ 0.9
NANOGQ9H9S0 AC244015.2-201ENST00000616358 1861 ntBASIC20.67■□□□□ 0.9
NANOGQ9H9S0 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.67■□□□□ 0.9
NANOGQ9H9S0 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NANOGQ9H9S0 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NANOGQ9H9S0 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC20.67■□□□□ 0.9
NANOGQ9H9S0 CA15P2-201ENST00000611168 834 ntBASIC20.67■□□□□ 0.9
NANOGQ9H9S0 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
NANOGQ9H9S0 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.67■□□□□ 0.9
NANOGQ9H9S0 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.67■□□□□ 0.9
NANOGQ9H9S0 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.67■□□□□ 0.9
NANOGQ9H9S0 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NANOGQ9H9S0 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
NANOGQ9H9S0 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NANOGQ9H9S0 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
NANOGQ9H9S0 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NANOGQ9H9S0 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NANOGQ9H9S0 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NANOGQ9H9S0 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
NANOGQ9H9S0 TK2-216ENST00000564917 1156 ntTSL 3 BASIC20.66■□□□□ 0.9
NANOGQ9H9S0 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
NANOGQ9H9S0 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC20.66■□□□□ 0.9
NANOGQ9H9S0 AC012354.3-201ENST00000623734 483 ntBASIC20.66■□□□□ 0.9
NANOGQ9H9S0 AC004687.1-201ENST00000579003 1625 ntBASIC20.66■□□□□ 0.9
NANOGQ9H9S0 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NANOGQ9H9S0 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NANOGQ9H9S0 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NANOGQ9H9S0 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NANOGQ9H9S0 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NANOGQ9H9S0 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NANOGQ9H9S0 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
NANOGQ9H9S0 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NANOGQ9H9S0 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.65■□□□□ 0.9
NANOGQ9H9S0 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NANOGQ9H9S0 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.65■□□□□ 0.9
NANOGQ9H9S0 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NANOGQ9H9S0 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
NANOGQ9H9S0 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NANOGQ9H9S0 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
NANOGQ9H9S0 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
NANOGQ9H9S0 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NANOGQ9H9S0 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NANOGQ9H9S0 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NANOGQ9H9S0 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.65■□□□□ 0.9
NANOGQ9H9S0 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
NANOGQ9H9S0 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
NANOGQ9H9S0 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.64■□□□□ 0.9
NANOGQ9H9S0 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
NANOGQ9H9S0 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
NANOGQ9H9S0 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
NANOGQ9H9S0 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NANOGQ9H9S0 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC20.64■□□□□ 0.89
NANOGQ9H9S0 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NANOGQ9H9S0 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
NANOGQ9H9S0 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NANOGQ9H9S0 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.64■□□□□ 0.89
NANOGQ9H9S0 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NANOGQ9H9S0 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.64■□□□□ 0.89
NANOGQ9H9S0 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
NANOGQ9H9S0 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.64■□□□□ 0.89
NANOGQ9H9S0 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NANOGQ9H9S0 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NANOGQ9H9S0 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NANOGQ9H9S0 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
NANOGQ9H9S0 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
NANOGQ9H9S0 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NANOGQ9H9S0 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
NANOGQ9H9S0 KRT8P33-201ENST00000508125 1423 ntBASIC20.63■□□□□ 0.89
NANOGQ9H9S0 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
NANOGQ9H9S0 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
NANOGQ9H9S0 YBX1P4-201ENST00000392794 808 ntBASIC20.63■□□□□ 0.89
NANOGQ9H9S0 CLTA-206ENST00000466396 695 ntTSL 2 BASIC20.63■□□□□ 0.89
NANOGQ9H9S0 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC20.63■□□□□ 0.89
NANOGQ9H9S0 AL033527.3-201ENST00000566366 1196 ntBASIC20.63■□□□□ 0.89
NANOGQ9H9S0 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC20.63■□□□□ 0.89
NANOGQ9H9S0 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.63■□□□□ 0.89
NANOGQ9H9S0 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
NANOGQ9H9S0 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms