Protein–RNA interactions for Protein: Q96BA8

CREB3L1, Cyclic AMP-responsive element-binding protein 3-like protein 1, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CREB3L1Q96BA8 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CREB3L1Q96BA8 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CREB3L1Q96BA8 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
CREB3L1Q96BA8 PVT1_1.1-201ENST00000615125 194 ntBASIC19.03■□□□□ 0.64
CREB3L1Q96BA8 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC19.03■□□□□ 0.64
CREB3L1Q96BA8 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CREB3L1Q96BA8 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CREB3L1Q96BA8 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
CREB3L1Q96BA8 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CREB3L1Q96BA8 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CREB3L1Q96BA8 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CREB3L1Q96BA8 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
CREB3L1Q96BA8 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CREB3L1Q96BA8 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CREB3L1Q96BA8 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
CREB3L1Q96BA8 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
CREB3L1Q96BA8 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
CREB3L1Q96BA8 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CREB3L1Q96BA8 AC090877.2-201ENST00000558441 1738 ntBASIC19.03■□□□□ 0.64
CREB3L1Q96BA8 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
CREB3L1Q96BA8 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.02■□□□□ 0.64
CREB3L1Q96BA8 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
CREB3L1Q96BA8 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CREB3L1Q96BA8 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CREB3L1Q96BA8 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CREB3L1Q96BA8 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC19.02■□□□□ 0.64
CREB3L1Q96BA8 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC19.02■□□□□ 0.64
CREB3L1Q96BA8 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CREB3L1Q96BA8 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CREB3L1Q96BA8 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CREB3L1Q96BA8 THA1P-201ENST00000590384 1145 ntBASIC19.02■□□□□ 0.64
CREB3L1Q96BA8 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC19.02■□□□□ 0.64
CREB3L1Q96BA8 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC19.02■□□□□ 0.64
CREB3L1Q96BA8 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.02■□□□□ 0.63
CREB3L1Q96BA8 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CREB3L1Q96BA8 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CREB3L1Q96BA8 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CREB3L1Q96BA8 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CREB3L1Q96BA8 LINC01521-201ENST00000504184 1943 ntBASIC19.01■□□□□ 0.63
CREB3L1Q96BA8 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CREB3L1Q96BA8 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC19.01■□□□□ 0.63
CREB3L1Q96BA8 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CREB3L1Q96BA8 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CREB3L1Q96BA8 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CREB3L1Q96BA8 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CREB3L1Q96BA8 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19■□□□□ 0.63
CREB3L1Q96BA8 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC19■□□□□ 0.63
CREB3L1Q96BA8 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19■□□□□ 0.63
CREB3L1Q96BA8 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CREB3L1Q96BA8 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19■□□□□ 0.63
CREB3L1Q96BA8 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC19■□□□□ 0.63
CREB3L1Q96BA8 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC19■□□□□ 0.63
CREB3L1Q96BA8 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CREB3L1Q96BA8 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CREB3L1Q96BA8 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
CREB3L1Q96BA8 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
CREB3L1Q96BA8 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
CREB3L1Q96BA8 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
CREB3L1Q96BA8 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC18.99■□□□□ 0.63
CREB3L1Q96BA8 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
CREB3L1Q96BA8 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CREB3L1Q96BA8 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CREB3L1Q96BA8 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.99■□□□□ 0.63
CREB3L1Q96BA8 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
CREB3L1Q96BA8 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC18.99■□□□□ 0.63
CREB3L1Q96BA8 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC18.99■□□□□ 0.63
CREB3L1Q96BA8 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CREB3L1Q96BA8 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC18.99■□□□□ 0.63
CREB3L1Q96BA8 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.99■□□□□ 0.63
CREB3L1Q96BA8 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CREB3L1Q96BA8 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CREB3L1Q96BA8 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CREB3L1Q96BA8 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CREB3L1Q96BA8 AC010542.4-201ENST00000563151 1910 ntBASIC18.98■□□□□ 0.63
CREB3L1Q96BA8 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC18.98■□□□□ 0.63
CREB3L1Q96BA8 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CREB3L1Q96BA8 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CREB3L1Q96BA8 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CREB3L1Q96BA8 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
CREB3L1Q96BA8 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
CREB3L1Q96BA8 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CREB3L1Q96BA8 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CREB3L1Q96BA8 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC18.98■□□□□ 0.63
CREB3L1Q96BA8 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
CREB3L1Q96BA8 KRT8P33-201ENST00000508125 1423 ntBASIC18.98■□□□□ 0.63
CREB3L1Q96BA8 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CREB3L1Q96BA8 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC18.98■□□□□ 0.63
CREB3L1Q96BA8 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC18.98■□□□□ 0.63
CREB3L1Q96BA8 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CREB3L1Q96BA8 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CREB3L1Q96BA8 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
CREB3L1Q96BA8 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CREB3L1Q96BA8 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CREB3L1Q96BA8 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CREB3L1Q96BA8 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
CREB3L1Q96BA8 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CREB3L1Q96BA8 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CREB3L1Q96BA8 AC103834.1-201ENST00000520383 144 ntBASIC18.97■□□□□ 0.63
CREB3L1Q96BA8 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CREB3L1Q96BA8 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms