Protein–RNA interactions for Protein: Q3KNW1

SNAI3, Zinc finger protein SNAI3, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI3Q3KNW1 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
SNAI3Q3KNW1 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SNAI3Q3KNW1 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SNAI3Q3KNW1 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SNAI3Q3KNW1 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC18.95■□□□□ 0.62
SNAI3Q3KNW1 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC18.95■□□□□ 0.62
SNAI3Q3KNW1 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SNAI3Q3KNW1 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SNAI3Q3KNW1 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC18.95■□□□□ 0.62
SNAI3Q3KNW1 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SNAI3Q3KNW1 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC18.95■□□□□ 0.62
SNAI3Q3KNW1 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
SNAI3Q3KNW1 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC18.95■□□□□ 0.62
SNAI3Q3KNW1 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
SNAI3Q3KNW1 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SNAI3Q3KNW1 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SNAI3Q3KNW1 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC18.95■□□□□ 0.62
SNAI3Q3KNW1 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SNAI3Q3KNW1 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC18.94■□□□□ 0.62
SNAI3Q3KNW1 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
SNAI3Q3KNW1 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC18.94■□□□□ 0.62
SNAI3Q3KNW1 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SNAI3Q3KNW1 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SNAI3Q3KNW1 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC18.94■□□□□ 0.62
SNAI3Q3KNW1 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
SNAI3Q3KNW1 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SNAI3Q3KNW1 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
SNAI3Q3KNW1 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SNAI3Q3KNW1 SERBP1P1-201ENST00000396021 1160 ntBASIC18.94■□□□□ 0.62
SNAI3Q3KNW1 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
SNAI3Q3KNW1 CA15P2-201ENST00000611168 834 ntBASIC18.94■□□□□ 0.62
SNAI3Q3KNW1 AC131212.1-201ENST00000613771 668 ntBASIC18.94■□□□□ 0.62
SNAI3Q3KNW1 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC18.94■□□□□ 0.62
SNAI3Q3KNW1 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
SNAI3Q3KNW1 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SNAI3Q3KNW1 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SNAI3Q3KNW1 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SNAI3Q3KNW1 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SNAI3Q3KNW1 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC18.94■□□□□ 0.62
SNAI3Q3KNW1 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SNAI3Q3KNW1 SYT6-210ENST00000641643 1587 ntBASIC18.93■□□□□ 0.62
SNAI3Q3KNW1 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC18.93■□□□□ 0.62
SNAI3Q3KNW1 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SNAI3Q3KNW1 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
SNAI3Q3KNW1 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SNAI3Q3KNW1 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SNAI3Q3KNW1 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
SNAI3Q3KNW1 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
SNAI3Q3KNW1 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SNAI3Q3KNW1 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC18.93■□□□□ 0.62
SNAI3Q3KNW1 STX4-202ENST00000394998 1498 ntTSL 2 BASIC18.93■□□□□ 0.62
SNAI3Q3KNW1 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SNAI3Q3KNW1 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SNAI3Q3KNW1 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC18.93■□□□□ 0.62
SNAI3Q3KNW1 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SNAI3Q3KNW1 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SNAI3Q3KNW1 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
SNAI3Q3KNW1 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SNAI3Q3KNW1 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SNAI3Q3KNW1 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SNAI3Q3KNW1 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SNAI3Q3KNW1 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC18.92■□□□□ 0.62
SNAI3Q3KNW1 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC18.92■□□□□ 0.62
SNAI3Q3KNW1 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SNAI3Q3KNW1 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
SNAI3Q3KNW1 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC18.92■□□□□ 0.62
SNAI3Q3KNW1 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC18.92■□□□□ 0.62
SNAI3Q3KNW1 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC18.92■□□□□ 0.62
SNAI3Q3KNW1 AL136116.3-201ENST00000402907 1138 ntBASIC18.92■□□□□ 0.62
SNAI3Q3KNW1 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC18.92■□□□□ 0.62
SNAI3Q3KNW1 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
SNAI3Q3KNW1 AL031602.1-201ENST00000633169 911 ntBASIC18.92■□□□□ 0.62
SNAI3Q3KNW1 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SNAI3Q3KNW1 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
SNAI3Q3KNW1 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SNAI3Q3KNW1 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC18.92■□□□□ 0.62
SNAI3Q3KNW1 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SNAI3Q3KNW1 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC18.92■□□□□ 0.62
SNAI3Q3KNW1 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
SNAI3Q3KNW1 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SNAI3Q3KNW1 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC18.91■□□□□ 0.62
SNAI3Q3KNW1 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SNAI3Q3KNW1 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SNAI3Q3KNW1 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SNAI3Q3KNW1 C11orf96-202ENST00000528572 1834 ntBASIC18.9■□□□□ 0.62
SNAI3Q3KNW1 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SNAI3Q3KNW1 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
SNAI3Q3KNW1 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SNAI3Q3KNW1 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
SNAI3Q3KNW1 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SNAI3Q3KNW1 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SNAI3Q3KNW1 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
SNAI3Q3KNW1 HES6-206ENST00000409574 738 ntTSL 2 BASIC18.9■□□□□ 0.62
SNAI3Q3KNW1 OR2I1P-207ENST00000453522 948 ntBASIC18.9■□□□□ 0.62
SNAI3Q3KNW1 DUX4L19-201ENST00000557448 1267 ntBASIC18.9■□□□□ 0.62
SNAI3Q3KNW1 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC18.9■□□□□ 0.62
SNAI3Q3KNW1 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
SNAI3Q3KNW1 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
SNAI3Q3KNW1 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SNAI3Q3KNW1 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms