Protein–RNA interactions for Protein: S4R434

TMEM56-RWDD3, TMEM56-RWDD3 readthrough, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-RWDD3S4R434 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TMEM56-RWDD3S4R434 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TMEM56-RWDD3S4R434 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TMEM56-RWDD3S4R434 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TMEM56-RWDD3S4R434 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC17.9■□□□□ 0.46
TMEM56-RWDD3S4R434 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
TMEM56-RWDD3S4R434 AC005229.4-201ENST00000610085 2198 ntBASIC17.9■□□□□ 0.46
TMEM56-RWDD3S4R434 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC17.9■□□□□ 0.46
TMEM56-RWDD3S4R434 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TMEM56-RWDD3S4R434 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.46
TMEM56-RWDD3S4R434 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC17.89■□□□□ 0.45
TMEM56-RWDD3S4R434 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TMEM56-RWDD3S4R434 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TMEM56-RWDD3S4R434 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TMEM56-RWDD3S4R434 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TMEM56-RWDD3S4R434 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TMEM56-RWDD3S4R434 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC17.89■□□□□ 0.45
TMEM56-RWDD3S4R434 SNX5-217ENST00000606557 1087 ntBASIC17.89■□□□□ 0.45
TMEM56-RWDD3S4R434 AC009086.3-201ENST00000623486 1008 ntBASIC17.89■□□□□ 0.45
TMEM56-RWDD3S4R434 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TMEM56-RWDD3S4R434 SLC25A24-204ENST00000569674 2357 ntBASIC17.89■□□□□ 0.45
TMEM56-RWDD3S4R434 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TMEM56-RWDD3S4R434 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
TMEM56-RWDD3S4R434 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TMEM56-RWDD3S4R434 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
TMEM56-RWDD3S4R434 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC17.88■□□□□ 0.45
TMEM56-RWDD3S4R434 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC17.88■□□□□ 0.45
TMEM56-RWDD3S4R434 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC17.88■□□□□ 0.45
TMEM56-RWDD3S4R434 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC17.88■□□□□ 0.45
TMEM56-RWDD3S4R434 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC17.88■□□□□ 0.45
TMEM56-RWDD3S4R434 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TMEM56-RWDD3S4R434 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TMEM56-RWDD3S4R434 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC17.88■□□□□ 0.45
TMEM56-RWDD3S4R434 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC17.88■□□□□ 0.45
TMEM56-RWDD3S4R434 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TMEM56-RWDD3S4R434 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TMEM56-RWDD3S4R434 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC17.88■□□□□ 0.45
TMEM56-RWDD3S4R434 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
TMEM56-RWDD3S4R434 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TMEM56-RWDD3S4R434 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
TMEM56-RWDD3S4R434 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TMEM56-RWDD3S4R434 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC17.87■□□□□ 0.45
TMEM56-RWDD3S4R434 DUX4L18-201ENST00000553347 1267 ntBASIC17.87■□□□□ 0.45
TMEM56-RWDD3S4R434 CA15P2-201ENST00000611168 834 ntBASIC17.87■□□□□ 0.45
TMEM56-RWDD3S4R434 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC17.87■□□□□ 0.45
TMEM56-RWDD3S4R434 AC074183.2-201ENST00000623112 922 ntBASIC17.87■□□□□ 0.45
TMEM56-RWDD3S4R434 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TMEM56-RWDD3S4R434 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC17.87■□□□□ 0.45
TMEM56-RWDD3S4R434 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TMEM56-RWDD3S4R434 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
TMEM56-RWDD3S4R434 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC17.87■□□□□ 0.45
TMEM56-RWDD3S4R434 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TMEM56-RWDD3S4R434 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TMEM56-RWDD3S4R434 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
TMEM56-RWDD3S4R434 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TMEM56-RWDD3S4R434 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC17.86■□□□□ 0.45
TMEM56-RWDD3S4R434 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TMEM56-RWDD3S4R434 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TMEM56-RWDD3S4R434 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC17.86■□□□□ 0.45
TMEM56-RWDD3S4R434 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
TMEM56-RWDD3S4R434 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TMEM56-RWDD3S4R434 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC17.86■□□□□ 0.45
TMEM56-RWDD3S4R434 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TMEM56-RWDD3S4R434 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC17.86■□□□□ 0.45
TMEM56-RWDD3S4R434 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
TMEM56-RWDD3S4R434 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC17.86■□□□□ 0.45
TMEM56-RWDD3S4R434 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TMEM56-RWDD3S4R434 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
TMEM56-RWDD3S4R434 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TMEM56-RWDD3S4R434 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TMEM56-RWDD3S4R434 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TMEM56-RWDD3S4R434 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
TMEM56-RWDD3S4R434 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TMEM56-RWDD3S4R434 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC17.85■□□□□ 0.45
TMEM56-RWDD3S4R434 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TMEM56-RWDD3S4R434 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TMEM56-RWDD3S4R434 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TMEM56-RWDD3S4R434 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC17.85■□□□□ 0.45
TMEM56-RWDD3S4R434 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC17.85■□□□□ 0.45
TMEM56-RWDD3S4R434 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC17.85■□□□□ 0.45
TMEM56-RWDD3S4R434 DUX4L4-201ENST00000566884 1269 ntBASIC17.85■□□□□ 0.45
TMEM56-RWDD3S4R434 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TMEM56-RWDD3S4R434 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TMEM56-RWDD3S4R434 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TMEM56-RWDD3S4R434 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TMEM56-RWDD3S4R434 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
TMEM56-RWDD3S4R434 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TMEM56-RWDD3S4R434 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
TMEM56-RWDD3S4R434 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC17.84■□□□□ 0.45
TMEM56-RWDD3S4R434 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC17.84■□□□□ 0.45
TMEM56-RWDD3S4R434 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TMEM56-RWDD3S4R434 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TMEM56-RWDD3S4R434 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
TMEM56-RWDD3S4R434 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC17.84■□□□□ 0.45
TMEM56-RWDD3S4R434 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC17.84■□□□□ 0.45
TMEM56-RWDD3S4R434 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC17.84■□□□□ 0.45
TMEM56-RWDD3S4R434 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TMEM56-RWDD3S4R434 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TMEM56-RWDD3S4R434 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TMEM56-RWDD3S4R434 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms