Protein–RNA interactions for Protein: Q9BSR8

YIPF4, Protein YIPF4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4Q9BSR8 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
YIPF4Q9BSR8 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC20.55■□□□□ 0.88
YIPF4Q9BSR8 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
YIPF4Q9BSR8 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
YIPF4Q9BSR8 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.55■□□□□ 0.88
YIPF4Q9BSR8 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
YIPF4Q9BSR8 AC127496.7-201ENST00000625110 1798 ntBASIC20.54■□□□□ 0.88
YIPF4Q9BSR8 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
YIPF4Q9BSR8 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC20.54■□□□□ 0.88
YIPF4Q9BSR8 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
YIPF4Q9BSR8 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
YIPF4Q9BSR8 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
YIPF4Q9BSR8 LINC01960-201ENST00000563759 1884 ntBASIC20.54■□□□□ 0.88
YIPF4Q9BSR8 LINC00526-201ENST00000581067 1875 ntBASIC20.54■□□□□ 0.88
YIPF4Q9BSR8 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
YIPF4Q9BSR8 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
YIPF4Q9BSR8 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.54■□□□□ 0.88
YIPF4Q9BSR8 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
YIPF4Q9BSR8 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
YIPF4Q9BSR8 ECEL1P1-201ENST00000373592 1742 ntBASIC20.54■□□□□ 0.88
YIPF4Q9BSR8 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.54■□□□□ 0.88
YIPF4Q9BSR8 AL136116.3-201ENST00000402907 1138 ntBASIC20.54■□□□□ 0.88
YIPF4Q9BSR8 NALT1-201ENST00000429224 738 ntTSL 5 BASIC20.54■□□□□ 0.88
YIPF4Q9BSR8 AC241377.3-202ENST00000626088 1088 ntBASIC20.54■□□□□ 0.88
YIPF4Q9BSR8 AC241585.3-202ENST00000628937 1088 ntBASIC20.54■□□□□ 0.88
YIPF4Q9BSR8 AC245100.8-202ENST00000629247 1058 ntBASIC20.54■□□□□ 0.88
YIPF4Q9BSR8 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
YIPF4Q9BSR8 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.54■□□□□ 0.88
YIPF4Q9BSR8 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.54■□□□□ 0.88
YIPF4Q9BSR8 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
YIPF4Q9BSR8 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.54■□□□□ 0.88
YIPF4Q9BSR8 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
YIPF4Q9BSR8 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
YIPF4Q9BSR8 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
YIPF4Q9BSR8 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
YIPF4Q9BSR8 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.53■□□□□ 0.88
YIPF4Q9BSR8 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
YIPF4Q9BSR8 GATM-206ENST00000558336 1522 ntTSL 2 BASIC20.53■□□□□ 0.88
YIPF4Q9BSR8 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.53■□□□□ 0.88
YIPF4Q9BSR8 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
YIPF4Q9BSR8 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
YIPF4Q9BSR8 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
YIPF4Q9BSR8 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
YIPF4Q9BSR8 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
YIPF4Q9BSR8 AL512631.2-201ENST00000604634 923 ntBASIC20.53■□□□□ 0.88
YIPF4Q9BSR8 pRNA.6-201ENST00000610482 90 ntBASIC20.53■□□□□ 0.88
YIPF4Q9BSR8 pRNA.5-201ENST00000612139 90 ntBASIC20.53■□□□□ 0.88
YIPF4Q9BSR8 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
YIPF4Q9BSR8 pRNA.11-201ENST00000618423 90 ntBASIC20.53■□□□□ 0.88
YIPF4Q9BSR8 pRNA.13-201ENST00000619112 90 ntBASIC20.53■□□□□ 0.88
YIPF4Q9BSR8 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
YIPF4Q9BSR8 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
YIPF4Q9BSR8 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
YIPF4Q9BSR8 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
YIPF4Q9BSR8 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.53■□□□□ 0.88
YIPF4Q9BSR8 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
YIPF4Q9BSR8 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
YIPF4Q9BSR8 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
YIPF4Q9BSR8 AC242852.2-201ENST00000615738 1807 ntBASIC20.53■□□□□ 0.88
YIPF4Q9BSR8 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
YIPF4Q9BSR8 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
YIPF4Q9BSR8 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
YIPF4Q9BSR8 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
YIPF4Q9BSR8 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
YIPF4Q9BSR8 AC131281.2-201ENST00000520478 145 ntBASIC20.52■□□□□ 0.88
YIPF4Q9BSR8 AL139246.5-201ENST00000606645 996 ntBASIC20.52■□□□□ 0.88
YIPF4Q9BSR8 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
YIPF4Q9BSR8 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
YIPF4Q9BSR8 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
YIPF4Q9BSR8 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.51■□□□□ 0.87
YIPF4Q9BSR8 SRD5A1P1-201ENST00000442297 786 ntBASIC20.51■□□□□ 0.87
YIPF4Q9BSR8 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
YIPF4Q9BSR8 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.51■□□□□ 0.87
YIPF4Q9BSR8 AL499627.2-201ENST00000606283 725 ntBASIC20.51■□□□□ 0.87
YIPF4Q9BSR8 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC20.51■□□□□ 0.87
YIPF4Q9BSR8 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.51■□□□□ 0.87
YIPF4Q9BSR8 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
YIPF4Q9BSR8 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
YIPF4Q9BSR8 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
YIPF4Q9BSR8 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
YIPF4Q9BSR8 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
YIPF4Q9BSR8 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
YIPF4Q9BSR8 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
YIPF4Q9BSR8 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
YIPF4Q9BSR8 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.5■□□□□ 0.87
YIPF4Q9BSR8 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
YIPF4Q9BSR8 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
YIPF4Q9BSR8 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
YIPF4Q9BSR8 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
YIPF4Q9BSR8 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
YIPF4Q9BSR8 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
YIPF4Q9BSR8 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
YIPF4Q9BSR8 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.5■□□□□ 0.87
YIPF4Q9BSR8 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
YIPF4Q9BSR8 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
YIPF4Q9BSR8 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
YIPF4Q9BSR8 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.5■□□□□ 0.87
YIPF4Q9BSR8 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
YIPF4Q9BSR8 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
YIPF4Q9BSR8 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms