Protein–RNA interactions for Protein: Q8NE22

SETD9, SET domain-containing protein 9, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SETD9Q8NE22 LBH-205ENST00000407930 756 ntTSL 2 BASIC20.09■□□□□ 0.81
SETD9Q8NE22 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
SETD9Q8NE22 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.09■□□□□ 0.81
SETD9Q8NE22 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SETD9Q8NE22 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SETD9Q8NE22 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.08■□□□□ 0.81
SETD9Q8NE22 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.08■□□□□ 0.81
SETD9Q8NE22 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SETD9Q8NE22 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SETD9Q8NE22 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SETD9Q8NE22 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.08■□□□□ 0.81
SETD9Q8NE22 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.08■□□□□ 0.81
SETD9Q8NE22 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.08■□□□□ 0.81
SETD9Q8NE22 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SETD9Q8NE22 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
SETD9Q8NE22 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SETD9Q8NE22 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
SETD9Q8NE22 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SETD9Q8NE22 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SETD9Q8NE22 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
SETD9Q8NE22 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SETD9Q8NE22 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.08■□□□□ 0.8
SETD9Q8NE22 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SETD9Q8NE22 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.07■□□□□ 0.8
SETD9Q8NE22 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SETD9Q8NE22 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
SETD9Q8NE22 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SETD9Q8NE22 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.07■□□□□ 0.8
SETD9Q8NE22 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SETD9Q8NE22 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SETD9Q8NE22 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SETD9Q8NE22 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC20.07■□□□□ 0.8
SETD9Q8NE22 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC20.07■□□□□ 0.8
SETD9Q8NE22 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SETD9Q8NE22 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SETD9Q8NE22 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SETD9Q8NE22 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.06■□□□□ 0.8
SETD9Q8NE22 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SETD9Q8NE22 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC20.06■□□□□ 0.8
SETD9Q8NE22 AC144652.1-201ENST00000609974 1624 ntBASIC20.06■□□□□ 0.8
SETD9Q8NE22 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SETD9Q8NE22 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SETD9Q8NE22 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC20.06■□□□□ 0.8
SETD9Q8NE22 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SETD9Q8NE22 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
SETD9Q8NE22 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
SETD9Q8NE22 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SETD9Q8NE22 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.06■□□□□ 0.8
SETD9Q8NE22 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SETD9Q8NE22 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.06■□□□□ 0.8
SETD9Q8NE22 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SETD9Q8NE22 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
SETD9Q8NE22 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SETD9Q8NE22 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SETD9Q8NE22 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.05■□□□□ 0.8
SETD9Q8NE22 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.05■□□□□ 0.8
SETD9Q8NE22 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC20.05■□□□□ 0.8
SETD9Q8NE22 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SETD9Q8NE22 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
SETD9Q8NE22 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.05■□□□□ 0.8
SETD9Q8NE22 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SETD9Q8NE22 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SETD9Q8NE22 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SETD9Q8NE22 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SETD9Q8NE22 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.04■□□□□ 0.8
SETD9Q8NE22 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SETD9Q8NE22 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.04■□□□□ 0.8
SETD9Q8NE22 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.04■□□□□ 0.8
SETD9Q8NE22 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SETD9Q8NE22 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SETD9Q8NE22 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SETD9Q8NE22 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SETD9Q8NE22 GAK-223ENST00000628912 497 ntTSL 5 BASIC20.04■□□□□ 0.8
SETD9Q8NE22 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SETD9Q8NE22 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SETD9Q8NE22 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SETD9Q8NE22 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.04■□□□□ 0.8
SETD9Q8NE22 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
SETD9Q8NE22 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SETD9Q8NE22 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.03■□□□□ 0.8
SETD9Q8NE22 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SETD9Q8NE22 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SETD9Q8NE22 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SETD9Q8NE22 LONRF2P2-201ENST00000439212 571 ntBASIC20.03■□□□□ 0.8
SETD9Q8NE22 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC20.03■□□□□ 0.8
SETD9Q8NE22 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC20.03■□□□□ 0.8
SETD9Q8NE22 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
SETD9Q8NE22 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.03■□□□□ 0.8
SETD9Q8NE22 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SETD9Q8NE22 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC20.03■□□□□ 0.8
SETD9Q8NE22 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.03■□□□□ 0.8
SETD9Q8NE22 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SETD9Q8NE22 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SETD9Q8NE22 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SETD9Q8NE22 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
SETD9Q8NE22 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
SETD9Q8NE22 MIR6765-201ENST00000614092 87 ntBASIC20.02■□□□□ 0.8
SETD9Q8NE22 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SETD9Q8NE22 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SETD9Q8NE22 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.02■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms