Protein–RNA interactions for Protein: Q9BSR8

YIPF4, Protein YIPF4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4Q9BSR8 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
YIPF4Q9BSR8 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC20.61■□□□□ 0.89
YIPF4Q9BSR8 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
YIPF4Q9BSR8 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.61■□□□□ 0.89
YIPF4Q9BSR8 SRR-208ENST00000576848 588 ntTSL 4 BASIC20.61■□□□□ 0.89
YIPF4Q9BSR8 RALB-208ENST00000631312 311 ntTSL 5 BASIC20.61■□□□□ 0.89
YIPF4Q9BSR8 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
YIPF4Q9BSR8 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
YIPF4Q9BSR8 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
YIPF4Q9BSR8 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
YIPF4Q9BSR8 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
YIPF4Q9BSR8 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
YIPF4Q9BSR8 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.61■□□□□ 0.89
YIPF4Q9BSR8 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
YIPF4Q9BSR8 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.6■□□□□ 0.89
YIPF4Q9BSR8 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
YIPF4Q9BSR8 ESRRAP2-201ENST00000418437 1549 ntBASIC20.6■□□□□ 0.89
YIPF4Q9BSR8 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
YIPF4Q9BSR8 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
YIPF4Q9BSR8 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
YIPF4Q9BSR8 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.6■□□□□ 0.89
YIPF4Q9BSR8 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
YIPF4Q9BSR8 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
YIPF4Q9BSR8 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
YIPF4Q9BSR8 MIR935-201ENST00000401179 91 ntBASIC20.59■□□□□ 0.89
YIPF4Q9BSR8 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC20.59■□□□□ 0.89
YIPF4Q9BSR8 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
YIPF4Q9BSR8 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
YIPF4Q9BSR8 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
YIPF4Q9BSR8 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
YIPF4Q9BSR8 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC20.59■□□□□ 0.89
YIPF4Q9BSR8 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.59■□□□□ 0.89
YIPF4Q9BSR8 AC087742.1-201ENST00000575880 1738 ntBASIC20.58■□□□□ 0.89
YIPF4Q9BSR8 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
YIPF4Q9BSR8 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.58■□□□□ 0.89
YIPF4Q9BSR8 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
YIPF4Q9BSR8 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
YIPF4Q9BSR8 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
YIPF4Q9BSR8 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
YIPF4Q9BSR8 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
YIPF4Q9BSR8 AC006455.2-201ENST00000429931 906 ntBASIC20.58■□□□□ 0.89
YIPF4Q9BSR8 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
YIPF4Q9BSR8 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC20.58■□□□□ 0.89
YIPF4Q9BSR8 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
YIPF4Q9BSR8 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
YIPF4Q9BSR8 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.58■□□□□ 0.88
YIPF4Q9BSR8 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
YIPF4Q9BSR8 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.88
YIPF4Q9BSR8 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
YIPF4Q9BSR8 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
YIPF4Q9BSR8 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
YIPF4Q9BSR8 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.57■□□□□ 0.88
YIPF4Q9BSR8 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
YIPF4Q9BSR8 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
YIPF4Q9BSR8 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
YIPF4Q9BSR8 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.57■□□□□ 0.88
YIPF4Q9BSR8 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
YIPF4Q9BSR8 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
YIPF4Q9BSR8 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
YIPF4Q9BSR8 RPP21-222ENST00000433076 577 ntTSL 2 BASIC20.57■□□□□ 0.88
YIPF4Q9BSR8 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
YIPF4Q9BSR8 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.57■□□□□ 0.88
YIPF4Q9BSR8 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.57■□□□□ 0.88
YIPF4Q9BSR8 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
YIPF4Q9BSR8 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC20.57■□□□□ 0.88
YIPF4Q9BSR8 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
YIPF4Q9BSR8 AC099791.2-201ENST00000605725 427 ntBASIC20.57■□□□□ 0.88
YIPF4Q9BSR8 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
YIPF4Q9BSR8 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.57■□□□□ 0.88
YIPF4Q9BSR8 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.57■□□□□ 0.88
YIPF4Q9BSR8 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.57■□□□□ 0.88
YIPF4Q9BSR8 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
YIPF4Q9BSR8 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
YIPF4Q9BSR8 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
YIPF4Q9BSR8 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.56■□□□□ 0.88
YIPF4Q9BSR8 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
YIPF4Q9BSR8 AC080038.3-201ENST00000623346 1952 ntBASIC20.56■□□□□ 0.88
YIPF4Q9BSR8 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
YIPF4Q9BSR8 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.56■□□□□ 0.88
YIPF4Q9BSR8 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
YIPF4Q9BSR8 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
YIPF4Q9BSR8 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
YIPF4Q9BSR8 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC20.56■□□□□ 0.88
YIPF4Q9BSR8 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
YIPF4Q9BSR8 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.56■□□□□ 0.88
YIPF4Q9BSR8 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
YIPF4Q9BSR8 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
YIPF4Q9BSR8 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
YIPF4Q9BSR8 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
YIPF4Q9BSR8 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
YIPF4Q9BSR8 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
YIPF4Q9BSR8 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
YIPF4Q9BSR8 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
YIPF4Q9BSR8 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.55■□□□□ 0.88
YIPF4Q9BSR8 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
YIPF4Q9BSR8 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
YIPF4Q9BSR8 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
YIPF4Q9BSR8 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.55■□□□□ 0.88
YIPF4Q9BSR8 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC20.55■□□□□ 0.88
YIPF4Q9BSR8 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms