Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SNRNP40Q96DI7 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC19.91■□□□□ 0.78
SNRNP40Q96DI7 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC19.91■□□□□ 0.78
SNRNP40Q96DI7 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC19.91■□□□□ 0.78
SNRNP40Q96DI7 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC19.91■□□□□ 0.78
SNRNP40Q96DI7 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SNRNP40Q96DI7 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
SNRNP40Q96DI7 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SNRNP40Q96DI7 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SNRNP40Q96DI7 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
SNRNP40Q96DI7 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SNRNP40Q96DI7 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
SNRNP40Q96DI7 CREM-210ENST00000374721 2020 ntTSL 5 BASIC19.9■□□□□ 0.78
SNRNP40Q96DI7 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
SNRNP40Q96DI7 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SNRNP40Q96DI7 NCF1B-203ENST00000435988 1254 ntBASIC19.9■□□□□ 0.78
SNRNP40Q96DI7 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SNRNP40Q96DI7 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC19.9■□□□□ 0.78
SNRNP40Q96DI7 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SNRNP40Q96DI7 AC011767.1-201ENST00000617410 1153 ntBASIC19.9■□□□□ 0.78
SNRNP40Q96DI7 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SNRNP40Q96DI7 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SNRNP40Q96DI7 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SNRNP40Q96DI7 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SNRNP40Q96DI7 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SNRNP40Q96DI7 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SNRNP40Q96DI7 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SNRNP40Q96DI7 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
SNRNP40Q96DI7 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC19.89■□□□□ 0.77
SNRNP40Q96DI7 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
SNRNP40Q96DI7 TESC-206ENST00000541210 936 ntTSL 3 BASIC19.89■□□□□ 0.77
SNRNP40Q96DI7 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SNRNP40Q96DI7 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SNRNP40Q96DI7 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC19.88■□□□□ 0.77
SNRNP40Q96DI7 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC19.88■□□□□ 0.77
SNRNP40Q96DI7 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SNRNP40Q96DI7 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC19.88■□□□□ 0.77
SNRNP40Q96DI7 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SNRNP40Q96DI7 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
SNRNP40Q96DI7 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SNRNP40Q96DI7 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SNRNP40Q96DI7 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
SNRNP40Q96DI7 KRT18P11-201ENST00000435214 1283 ntBASIC19.88■□□□□ 0.77
SNRNP40Q96DI7 AC068587.7-201ENST00000641602 218 ntBASIC19.88■□□□□ 0.77
SNRNP40Q96DI7 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SNRNP40Q96DI7 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC19.88■□□□□ 0.77
SNRNP40Q96DI7 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC19.88■□□□□ 0.77
SNRNP40Q96DI7 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
SNRNP40Q96DI7 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC19.87■□□□□ 0.77
SNRNP40Q96DI7 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SNRNP40Q96DI7 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC19.87■□□□□ 0.77
SNRNP40Q96DI7 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SNRNP40Q96DI7 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
SNRNP40Q96DI7 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
SNRNP40Q96DI7 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC19.87■□□□□ 0.77
SNRNP40Q96DI7 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC19.87■□□□□ 0.77
SNRNP40Q96DI7 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC19.87■□□□□ 0.77
SNRNP40Q96DI7 SPI1-203ENST00000533030 661 ntTSL 2 BASIC19.87■□□□□ 0.77
SNRNP40Q96DI7 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC19.87■□□□□ 0.77
SNRNP40Q96DI7 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC19.87■□□□□ 0.77
SNRNP40Q96DI7 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SNRNP40Q96DI7 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SNRNP40Q96DI7 AC004687.1-201ENST00000579003 1625 ntBASIC19.87■□□□□ 0.77
SNRNP40Q96DI7 EI24-211ENST00000534546 1544 ntTSL 2 BASIC19.86■□□□□ 0.77
SNRNP40Q96DI7 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SNRNP40Q96DI7 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SNRNP40Q96DI7 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SNRNP40Q96DI7 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SNRNP40Q96DI7 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SNRNP40Q96DI7 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SNRNP40Q96DI7 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
SNRNP40Q96DI7 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC19.86■□□□□ 0.77
SNRNP40Q96DI7 SMUG1P1-201ENST00000590640 811 ntBASIC19.86■□□□□ 0.77
SNRNP40Q96DI7 WT1-AS_3.1-201ENST00000613262 234 ntBASIC19.86■□□□□ 0.77
SNRNP40Q96DI7 ESRRAP2-201ENST00000418437 1549 ntBASIC19.86■□□□□ 0.77
SNRNP40Q96DI7 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
SNRNP40Q96DI7 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC19.86■□□□□ 0.77
SNRNP40Q96DI7 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC19.86■□□□□ 0.77
SNRNP40Q96DI7 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
SNRNP40Q96DI7 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SNRNP40Q96DI7 MIR663A-201ENST00000385250 93 ntBASIC19.85■□□□□ 0.77
SNRNP40Q96DI7 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC19.85■□□□□ 0.77
SNRNP40Q96DI7 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SNRNP40Q96DI7 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SNRNP40Q96DI7 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SNRNP40Q96DI7 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SNRNP40Q96DI7 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
SNRNP40Q96DI7 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC19.84■□□□□ 0.77
SNRNP40Q96DI7 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SNRNP40Q96DI7 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SNRNP40Q96DI7 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SNRNP40Q96DI7 GPX1P1-201ENST00000388829 606 ntBASIC19.84■□□□□ 0.77
SNRNP40Q96DI7 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SNRNP40Q96DI7 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC19.84■□□□□ 0.77
SNRNP40Q96DI7 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC19.84■□□□□ 0.77
SNRNP40Q96DI7 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.84■□□□□ 0.77
SNRNP40Q96DI7 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC19.84■□□□□ 0.77
SNRNP40Q96DI7 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC19.84■□□□□ 0.77
SNRNP40Q96DI7 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC19.84■□□□□ 0.77
SNRNP40Q96DI7 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms