Protein–RNA interactions for Protein: P43588

RPN11, Ubiquitin carboxyl-terminal hydrolase RPN11, yeastyeast

Known RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPN11P43588 MOT2YER068W 1764 nt4.7□□□□□ -1.66
RPN11P43588 GGA1YDR358W 1674 nt4.7□□□□□ -1.66
RPN11P43588 NUP2YLR335W 2163 nt4.7□□□□□ -1.66
RPN11P43588 IME4YGL192W 1803 nt4.69□□□□□ -1.66
RPN11P43588 YGR015CYGR015C 987 nt4.69□□□□□ -1.66
RPN11P43588 POP6YGR030C 477 nt4.69□□□□□ -1.66
RPN11P43588 YGR168CYGR168C 1131 nt4.69□□□□□ -1.66
RPN11P43588 YHB1YGR234W 1200 nt4.69□□□□□ -1.66
RPN11P43588 YHR112CYHR112C 1137 nt4.69□□□□□ -1.66
RPN11P43588 ASC1YMR116C 960 nt4.69□□□□□ -1.66
RPN11P43588 COX11YPL132W 903 nt4.69□□□□□ -1.66
RPN11P43588 TIM12YBR091C 330 nt4.69□□□□□ -1.66
RPN11P43588 RRI1YDL216C 1323 nt4.69□□□□□ -1.66
RPN11P43588 RRN3YKL125W 1884 nt4.69□□□□□ -1.66
RPN11P43588 CDC4YFL009W 2340 nt4.68□□□□□ -1.66
RPN11P43588 CLF1YLR117C 2064 nt4.68□□□□□ -1.66
RPN11P43588 TRP4YDR354W 1143 nt4.68□□□□□ -1.66
RPN11P43588 YGR219WYGR219W 342 nt4.68□□□□□ -1.66
RPN11P43588 SFH5YJL145W 885 nt4.68□□□□□ -1.66
RPN11P43588 TFA2YKR062W 987 nt4.68□□□□□ -1.66
RPN11P43588 YAR030CYAR030C 342 nt4.68□□□□□ -1.66
RPN11P43588 MAP1YLR244C 1164 nt4.68□□□□□ -1.66
RPN11P43588 UBC12YLR306W 567 nt4.68□□□□□ -1.66
RPN11P43588 YLR462WYLR462W 609 nt4.68□□□□□ -1.66
RPN11P43588 YBR089WYBR089W 600 nt4.68□□□□□ -1.66
RPN11P43588 PBN1YCL052C 1251 nt4.68□□□□□ -1.66
RPN11P43588 RPG1YBR079C 2895 nt4.67□□□□□ -1.66
RPN11P43588 MTC3YGL226W 372 nt4.67□□□□□ -1.66
RPN11P43588 GTF1YGR102C 552 nt4.67□□□□□ -1.66
RPN11P43588 BNA1YJR025C 534 nt4.67□□□□□ -1.66
RPN11P43588 TTI2YJR136C 1266 nt4.67□□□□□ -1.66
RPN11P43588 EBP2YKL172W 1284 nt4.67□□□□□ -1.66
RPN11P43588 YLR346CYLR346C 306 nt4.67□□□□□ -1.66
RPN11P43588 NAT3YPR131C 588 nt4.67□□□□□ -1.66
RPN11P43588 LDB17YDL146W 1476 nt4.67□□□□□ -1.66
RPN11P43588 KAR1YNL188W 1302 nt4.67□□□□□ -1.66
RPN11P43588 KAR5YMR065W 1515 nt4.67□□□□□ -1.66
RPN11P43588 PMT6YGR199W 2280 nt4.66□□□□□ -1.66
RPN11P43588 SUM1YDR310C 3189 nt4.66□□□□□ -1.66
RPN11P43588 WTM2YOR229W 1404 nt4.66□□□□□ -1.66
RPN11P43588 YCR016WYCR016W 873 nt4.66□□□□□ -1.66
RPN11P43588 GLE2YER107C 1098 nt4.66□□□□□ -1.66
RPN11P43588 NSA2YER126C 786 nt4.66□□□□□ -1.66
RPN11P43588 YGL258W-AYGL258W-A 234 nt4.66□□□□□ -1.66
RPN11P43588 ECT1YGR007W 972 nt4.66□□□□□ -1.66
RPN11P43588 YGR122WYGR122W 1209 nt4.66□□□□□ -1.66
RPN11P43588 YHR193C-AYHR193C-A 375 nt4.66□□□□□ -1.66
RPN11P43588 CDC73YLR418C 1182 nt4.66□□□□□ -1.66
RPN11P43588 MTG1YMR097C 1104 nt4.66□□□□□ -1.66
RPN11P43588 TFB6YOR352W 1032 nt4.66□□□□□ -1.66
RPN11P43588 TRM8YDL201W 861 nt4.65□□□□□ -1.67
RPN11P43588 IMP3YHR148W 552 nt4.65□□□□□ -1.67
RPN11P43588 YLR198CYLR198C 360 nt4.65□□□□□ -1.67
RPN11P43588 RAD10YML095C 633 nt4.65□□□□□ -1.67
RPN11P43588 SEC65YML105C 822 nt4.65□□□□□ -1.67
RPN11P43588 YMR178WYMR178W 825 nt4.65□□□□□ -1.67
RPN11P43588 OCA2YNL056W 594 nt4.65□□□□□ -1.67
RPN11P43588 TEX1YNL253W 1269 nt4.65□□□□□ -1.67
RPN11P43588 RPN8YOR261C 1017 nt4.65□□□□□ -1.67
RPN11P43588 MDL1YLR188W 2088 nt4.65□□□□□ -1.67
RPN11P43588 TOG1YER184C 2385 nt4.64□□□□□ -1.67
RPN11P43588 CRT10YOL063C 2874 nt4.64□□□□□ -1.67
RPN11P43588 SIP5YMR140W 1470 nt4.64□□□□□ -1.67
RPN11P43588 YDR271CYDR271C 372 nt4.64□□□□□ -1.67
RPN11P43588 SDT1YGL224C 843 nt4.64□□□□□ -1.67
RPN11P43588 DID4YKL002W 699 nt4.64□□□□□ -1.67
RPN11P43588 NIT3YLR351C 876 nt4.64□□□□□ -1.67
RPN11P43588 ROT1YMR200W 771 nt4.64□□□□□ -1.67
RPN11P43588 YIP3YNL044W 531 nt4.64□□□□□ -1.67
RPN11P43588 ATG19YOL082W 1248 nt4.64□□□□□ -1.67
RPN11P43588 MRPL37YBR268W 318 nt4.64□□□□□ -1.67
RPN11P43588 BSD2YBR290W 966 nt4.64□□□□□ -1.67
RPN11P43588 YGR027W-BYGR027W-B 5268 nt4.64□□□□□ -1.67
RPN11P43588 YLR227W-BYLR227W-B 5268 nt4.64□□□□□ -1.67
RPN11P43588 YPR158C-DYPR158C-D 5268 nt4.64□□□□□ -1.67
RPN11P43588 HMS1YOR032C 1305 nt4.64□□□□□ -1.67
RPN11P43588 SKG6YHR149C 2205 nt4.64□□□□□ -1.67
RPN11P43588 RRG1YDR065W 1098 nt4.63□□□□□ -1.67
RPN11P43588 YDR124WYDR124W 975 nt4.63□□□□□ -1.67
RPN11P43588 YBL077WYBL077W 432 nt4.63□□□□□ -1.67
RPN11P43588 YBR056W-AYBR056W-A 201 nt4.63□□□□□ -1.67
RPN11P43588 YBR134WYBR134W 402 nt4.63□□□□□ -1.67
RPN11P43588 PEX34YCL056C 435 nt4.63□□□□□ -1.67
RPN11P43588 NOG1YPL093W 1944 nt4.63□□□□□ -1.67
RPN11P43588 CLN2YPL256C 1638 nt4.63□□□□□ -1.67
RPN11P43588 ZRC1YMR243C 1329 nt4.63□□□□□ -1.67
RPN11P43588 OCT1YKL134C 2319 nt4.63□□□□□ -1.67
RPN11P43588 MCM4YPR019W 2802 nt4.63□□□□□ -1.67
RPN11P43588 PRP19YLL036C 1512 nt4.62□□□□□ -1.67
RPN11P43588 SNF3YDL194W 2655 nt4.62□□□□□ -1.67
RPN11P43588 SNL1YIL016W 480 nt4.62□□□□□ -1.67
RPN11P43588 HYM1YKL189W 1200 nt4.62□□□□□ -1.67
RPN11P43588 ACK1YDL203C 1872 nt4.62□□□□□ -1.67
RPN11P43588 RIT1YMR283C 1542 nt4.62□□□□□ -1.67
RPN11P43588 BBC1YJL020C 3474 nt4.61□□□□□ -1.67
RPN11P43588 UBP10YNL186W 2379 nt4.61□□□□□ -1.67
RPN11P43588 PEX19YDL065C 1029 nt4.61□□□□□ -1.67
RPN11P43588 LNP1YHR192W 837 nt4.61□□□□□ -1.67
RPN11P43588 GPP1YIL053W 753 nt4.61□□□□□ -1.67
RPN11P43588 PHO86YJL117W 936 nt4.61□□□□□ -1.67
Retrieved 100 of 7,029 protein–RNA pairs in 39.3 ms