Protein–RNA interactions for Protein: Q8TDI0

CHD5, Chromodomain-helicase-DNA-binding protein 5, humanhuman

Predictions only

Length 1,954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5Q8TDI0 STX4-202ENST00000394998 1498 ntTSL 2 BASIC22.49■■□□□ 1.19
CHD5Q8TDI0 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CHD5Q8TDI0 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC22.49■■□□□ 1.19
CHD5Q8TDI0 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC22.49■■□□□ 1.19
CHD5Q8TDI0 AC005837.3-201ENST00000612163 286 ntBASIC22.49■■□□□ 1.19
CHD5Q8TDI0 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CHD5Q8TDI0 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CHD5Q8TDI0 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CHD5Q8TDI0 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC22.49■■□□□ 1.19
CHD5Q8TDI0 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC22.49■■□□□ 1.19
CHD5Q8TDI0 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
CHD5Q8TDI0 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
CHD5Q8TDI0 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
CHD5Q8TDI0 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
CHD5Q8TDI0 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CHD5Q8TDI0 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CHD5Q8TDI0 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
CHD5Q8TDI0 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CHD5Q8TDI0 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CHD5Q8TDI0 ZNRF2P3-201ENST00000424200 374 ntBASIC22.49■■□□□ 1.19
CHD5Q8TDI0 AC142381.2-201ENST00000566120 298 ntBASIC22.49■■□□□ 1.19
CHD5Q8TDI0 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
CHD5Q8TDI0 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
CHD5Q8TDI0 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CHD5Q8TDI0 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC22.48■■□□□ 1.19
CHD5Q8TDI0 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
CHD5Q8TDI0 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
CHD5Q8TDI0 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC22.48■■□□□ 1.19
CHD5Q8TDI0 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CHD5Q8TDI0 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC22.48■■□□□ 1.19
CHD5Q8TDI0 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
CHD5Q8TDI0 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC22.48■■□□□ 1.19
CHD5Q8TDI0 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC22.47■■□□□ 1.19
CHD5Q8TDI0 AP005435.1-201ENST00000529293 1178 ntBASIC22.47■■□□□ 1.19
CHD5Q8TDI0 AC008764.7-201ENST00000593779 1081 ntBASIC22.47■■□□□ 1.19
CHD5Q8TDI0 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC22.47■■□□□ 1.19
CHD5Q8TDI0 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC22.47■■□□□ 1.19
CHD5Q8TDI0 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC22.47■■□□□ 1.19
CHD5Q8TDI0 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC22.47■■□□□ 1.19
CHD5Q8TDI0 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
CHD5Q8TDI0 CA15P2-201ENST00000611168 834 ntBASIC22.47■■□□□ 1.19
CHD5Q8TDI0 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
CHD5Q8TDI0 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC22.47■■□□□ 1.19
CHD5Q8TDI0 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CHD5Q8TDI0 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC22.46■■□□□ 1.19
CHD5Q8TDI0 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
CHD5Q8TDI0 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC22.46■■□□□ 1.19
CHD5Q8TDI0 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC22.46■■□□□ 1.19
CHD5Q8TDI0 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC22.46■■□□□ 1.19
CHD5Q8TDI0 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
CHD5Q8TDI0 RHOF-204ENST00000537265 699 ntTSL 2 BASIC22.46■■□□□ 1.19
CHD5Q8TDI0 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC22.46■■□□□ 1.19
CHD5Q8TDI0 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CHD5Q8TDI0 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CHD5Q8TDI0 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC22.45■■□□□ 1.19
CHD5Q8TDI0 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.19
CHD5Q8TDI0 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
CHD5Q8TDI0 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
CHD5Q8TDI0 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
CHD5Q8TDI0 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC22.45■■□□□ 1.18
CHD5Q8TDI0 AC105265.2-201ENST00000467189 838 ntBASIC22.45■■□□□ 1.18
CHD5Q8TDI0 AICDA-202ENST00000537228 667 ntTSL 5 BASIC22.45■■□□□ 1.18
CHD5Q8TDI0 C9orf163-202ENST00000624034 2573 ntBASIC22.45■■□□□ 1.18
CHD5Q8TDI0 ME2-208ENST00000638937 2471 ntTSL 5 BASIC22.45■■□□□ 1.18
CHD5Q8TDI0 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC22.45■■□□□ 1.18
CHD5Q8TDI0 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
CHD5Q8TDI0 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CHD5Q8TDI0 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
CHD5Q8TDI0 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC22.45■■□□□ 1.18
CHD5Q8TDI0 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC22.45■■□□□ 1.18
CHD5Q8TDI0 IGHV3-19-201ENST00000521488 291 ntBASIC22.45■■□□□ 1.18
CHD5Q8TDI0 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
CHD5Q8TDI0 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC22.45■■□□□ 1.18
CHD5Q8TDI0 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC22.44■■□□□ 1.18
CHD5Q8TDI0 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC22.44■■□□□ 1.18
CHD5Q8TDI0 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CHD5Q8TDI0 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
CHD5Q8TDI0 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CHD5Q8TDI0 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC22.44■■□□□ 1.18
CHD5Q8TDI0 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC22.44■■□□□ 1.18
CHD5Q8TDI0 COMT-203ENST00000403184 2217 ntTSL 2 BASIC22.44■■□□□ 1.18
CHD5Q8TDI0 AC091305.1-201ENST00000479476 895 ntBASIC22.44■■□□□ 1.18
CHD5Q8TDI0 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC22.44■■□□□ 1.18
CHD5Q8TDI0 MPST-208ENST00000628507 698 ntTSL 5 BASIC22.44■■□□□ 1.18
CHD5Q8TDI0 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CHD5Q8TDI0 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC22.44■■□□□ 1.18
CHD5Q8TDI0 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC22.44■■□□□ 1.18
CHD5Q8TDI0 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
CHD5Q8TDI0 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CHD5Q8TDI0 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
CHD5Q8TDI0 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
CHD5Q8TDI0 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CHD5Q8TDI0 EBPL-204ENST00000378272 766 ntTSL 3 BASIC22.43■■□□□ 1.18
CHD5Q8TDI0 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC22.43■■□□□ 1.18
CHD5Q8TDI0 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
CHD5Q8TDI0 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC22.43■■□□□ 1.18
CHD5Q8TDI0 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
CHD5Q8TDI0 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CHD5Q8TDI0 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC22.43■■□□□ 1.18
CHD5Q8TDI0 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms