Protein–RNA interactions for Protein: Q86VV8

RTTN, Rotatin, humanhuman

Predictions only

Length 2,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTTNQ86VV8 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RTTNQ86VV8 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RTTNQ86VV8 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RTTNQ86VV8 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
RTTNQ86VV8 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RTTNQ86VV8 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RTTNQ86VV8 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
RTTNQ86VV8 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RTTNQ86VV8 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
RTTNQ86VV8 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC19.39■□□□□ 0.69
RTTNQ86VV8 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RTTNQ86VV8 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC19.39■□□□□ 0.69
RTTNQ86VV8 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
RTTNQ86VV8 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC19.39■□□□□ 0.69
RTTNQ86VV8 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RTTNQ86VV8 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.69
RTTNQ86VV8 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
RTTNQ86VV8 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
RTTNQ86VV8 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC19.38■□□□□ 0.69
RTTNQ86VV8 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
RTTNQ86VV8 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RTTNQ86VV8 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RTTNQ86VV8 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RTTNQ86VV8 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RTTNQ86VV8 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC19.38■□□□□ 0.69
RTTNQ86VV8 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RTTNQ86VV8 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RTTNQ86VV8 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RTTNQ86VV8 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RTTNQ86VV8 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RTTNQ86VV8 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RTTNQ86VV8 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC19.37■□□□□ 0.69
RTTNQ86VV8 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RTTNQ86VV8 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC19.37■□□□□ 0.69
RTTNQ86VV8 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
RTTNQ86VV8 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.37■□□□□ 0.69
RTTNQ86VV8 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RTTNQ86VV8 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RTTNQ86VV8 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RTTNQ86VV8 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
RTTNQ86VV8 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
RTTNQ86VV8 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC19.37■□□□□ 0.69
RTTNQ86VV8 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
RTTNQ86VV8 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RTTNQ86VV8 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC19.36■□□□□ 0.69
RTTNQ86VV8 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RTTNQ86VV8 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RTTNQ86VV8 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC19.36■□□□□ 0.69
RTTNQ86VV8 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
RTTNQ86VV8 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
RTTNQ86VV8 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
RTTNQ86VV8 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
RTTNQ86VV8 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC19.36■□□□□ 0.69
RTTNQ86VV8 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RTTNQ86VV8 AL031432.3-201ENST00000607698 485 ntBASIC19.36■□□□□ 0.69
RTTNQ86VV8 ANKRD20A6P-201ENST00000618763 204 ntBASIC19.36■□□□□ 0.69
RTTNQ86VV8 SF1-220ENST00000626028 704 ntTSL 2 BASIC19.36■□□□□ 0.69
RTTNQ86VV8 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC19.36■□□□□ 0.69
RTTNQ86VV8 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RTTNQ86VV8 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RTTNQ86VV8 EP400NL-214ENST00000641289 2402 ntBASIC19.35■□□□□ 0.69
RTTNQ86VV8 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC19.35■□□□□ 0.69
RTTNQ86VV8 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RTTNQ86VV8 LINC01529-204ENST00000636474 1715 ntBASIC19.35■□□□□ 0.69
RTTNQ86VV8 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
RTTNQ86VV8 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RTTNQ86VV8 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
RTTNQ86VV8 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
RTTNQ86VV8 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RTTNQ86VV8 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
RTTNQ86VV8 RARRES2P11-201ENST00000635158 484 ntBASIC19.35■□□□□ 0.69
RTTNQ86VV8 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RTTNQ86VV8 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC19.34■□□□□ 0.69
RTTNQ86VV8 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC19.34■□□□□ 0.69
RTTNQ86VV8 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RTTNQ86VV8 HYI-206ENST00000372434 1025 ntTSL 5 BASIC19.34■□□□□ 0.69
RTTNQ86VV8 PBX2P1-201ENST00000493219 1291 ntBASIC19.34■□□□□ 0.69
RTTNQ86VV8 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
RTTNQ86VV8 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
RTTNQ86VV8 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.34■□□□□ 0.69
RTTNQ86VV8 AC097381.1-201ENST00000429019 1296 ntBASIC19.33■□□□□ 0.69
RTTNQ86VV8 AC099791.2-201ENST00000605725 427 ntBASIC19.33■□□□□ 0.69
RTTNQ86VV8 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RTTNQ86VV8 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
RTTNQ86VV8 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC19.33■□□□□ 0.69
RTTNQ86VV8 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.33■□□□□ 0.69
RTTNQ86VV8 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RTTNQ86VV8 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RTTNQ86VV8 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC19.33■□□□□ 0.68
RTTNQ86VV8 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
RTTNQ86VV8 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC19.33■□□□□ 0.68
RTTNQ86VV8 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
RTTNQ86VV8 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RTTNQ86VV8 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RTTNQ86VV8 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
RTTNQ86VV8 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RTTNQ86VV8 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
RTTNQ86VV8 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RTTNQ86VV8 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RTTNQ86VV8 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms