Protein–RNA interactions for Protein: Q5VT98

PRAMEF20, PRAME family member 20, humanhuman

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF20Q5VT98 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
PRAMEF20Q5VT98 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
PRAMEF20Q5VT98 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PRAMEF20Q5VT98 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
PRAMEF20Q5VT98 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
PRAMEF20Q5VT98 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
PRAMEF20Q5VT98 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PRAMEF20Q5VT98 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
PRAMEF20Q5VT98 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20.21■□□□□ 0.83
PRAMEF20Q5VT98 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PRAMEF20Q5VT98 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.21■□□□□ 0.83
PRAMEF20Q5VT98 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.21■□□□□ 0.83
PRAMEF20Q5VT98 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.21■□□□□ 0.83
PRAMEF20Q5VT98 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.21■□□□□ 0.83
PRAMEF20Q5VT98 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
PRAMEF20Q5VT98 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
PRAMEF20Q5VT98 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
PRAMEF20Q5VT98 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PRAMEF20Q5VT98 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PRAMEF20Q5VT98 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC20.2■□□□□ 0.82
PRAMEF20Q5VT98 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.2■□□□□ 0.82
PRAMEF20Q5VT98 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PRAMEF20Q5VT98 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PRAMEF20Q5VT98 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
PRAMEF20Q5VT98 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
PRAMEF20Q5VT98 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.2■□□□□ 0.82
PRAMEF20Q5VT98 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
PRAMEF20Q5VT98 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.19■□□□□ 0.82
PRAMEF20Q5VT98 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
PRAMEF20Q5VT98 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20.19■□□□□ 0.82
PRAMEF20Q5VT98 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC20.19■□□□□ 0.82
PRAMEF20Q5VT98 TSPY26P-201ENST00000476365 1326 ntBASIC20.19■□□□□ 0.82
PRAMEF20Q5VT98 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PRAMEF20Q5VT98 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
PRAMEF20Q5VT98 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
PRAMEF20Q5VT98 STX4-202ENST00000394998 1498 ntTSL 2 BASIC20.18■□□□□ 0.82
PRAMEF20Q5VT98 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
PRAMEF20Q5VT98 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PRAMEF20Q5VT98 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
PRAMEF20Q5VT98 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC20.18■□□□□ 0.82
PRAMEF20Q5VT98 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
PRAMEF20Q5VT98 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
PRAMEF20Q5VT98 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PRAMEF20Q5VT98 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PRAMEF20Q5VT98 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
PRAMEF20Q5VT98 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
PRAMEF20Q5VT98 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC20.18■□□□□ 0.82
PRAMEF20Q5VT98 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
PRAMEF20Q5VT98 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
PRAMEF20Q5VT98 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PRAMEF20Q5VT98 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
PRAMEF20Q5VT98 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PRAMEF20Q5VT98 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC20.17■□□□□ 0.82
PRAMEF20Q5VT98 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC20.17■□□□□ 0.82
PRAMEF20Q5VT98 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PRAMEF20Q5VT98 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PRAMEF20Q5VT98 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.17■□□□□ 0.82
PRAMEF20Q5VT98 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PRAMEF20Q5VT98 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
PRAMEF20Q5VT98 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PRAMEF20Q5VT98 RHOF-204ENST00000537265 699 ntTSL 2 BASIC20.16■□□□□ 0.82
PRAMEF20Q5VT98 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PRAMEF20Q5VT98 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PRAMEF20Q5VT98 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
PRAMEF20Q5VT98 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.16■□□□□ 0.82
PRAMEF20Q5VT98 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.16■□□□□ 0.82
PRAMEF20Q5VT98 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
PRAMEF20Q5VT98 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
PRAMEF20Q5VT98 IGHV3-19-201ENST00000521488 291 ntBASIC20.15■□□□□ 0.82
PRAMEF20Q5VT98 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC20.15■□□□□ 0.82
PRAMEF20Q5VT98 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC20.15■□□□□ 0.82
PRAMEF20Q5VT98 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
PRAMEF20Q5VT98 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PRAMEF20Q5VT98 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC20.15■□□□□ 0.82
PRAMEF20Q5VT98 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
PRAMEF20Q5VT98 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PRAMEF20Q5VT98 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PRAMEF20Q5VT98 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
PRAMEF20Q5VT98 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PRAMEF20Q5VT98 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.14■□□□□ 0.81
PRAMEF20Q5VT98 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.14■□□□□ 0.81
PRAMEF20Q5VT98 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20.14■□□□□ 0.81
PRAMEF20Q5VT98 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
PRAMEF20Q5VT98 IRS3P-201ENST00000223076 1006 ntBASIC20.14■□□□□ 0.81
PRAMEF20Q5VT98 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
PRAMEF20Q5VT98 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.14■□□□□ 0.81
PRAMEF20Q5VT98 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC20.14■□□□□ 0.81
PRAMEF20Q5VT98 AICDA-202ENST00000537228 667 ntTSL 5 BASIC20.14■□□□□ 0.81
PRAMEF20Q5VT98 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PRAMEF20Q5VT98 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PRAMEF20Q5VT98 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC20.14■□□□□ 0.81
PRAMEF20Q5VT98 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PRAMEF20Q5VT98 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
PRAMEF20Q5VT98 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.14■□□□□ 0.81
PRAMEF20Q5VT98 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
PRAMEF20Q5VT98 DUSP8P3-201ENST00000399571 1760 ntBASIC20.13■□□□□ 0.81
PRAMEF20Q5VT98 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.13■□□□□ 0.81
PRAMEF20Q5VT98 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.13■□□□□ 0.81
PRAMEF20Q5VT98 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PRAMEF20Q5VT98 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 333.5 ms