Protein–RNA interactions for Protein: P36534

MRPL40, 54S ribosomal protein L40, mitochondrial, yeastyeast

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MRPL40P36534 tQ(UUG)D1tQ(UUG)D1 72 nt4.2□□□□□ -1.74
MRPL40P36534 tQ(UUG)D2tQ(UUG)D2 72 nt4.2□□□□□ -1.74
MRPL40P36534 tQ(UUG)D3tQ(UUG)D3 72 nt4.2□□□□□ -1.74
MRPL40P36534 tQ(UUG)E1tQ(UUG)E1 72 nt4.2□□□□□ -1.74
MRPL40P36534 tQ(UUG)HtQ(UUG)H 72 nt4.2□□□□□ -1.74
MRPL40P36534 tQ(UUG)LtQ(UUG)L 72 nt4.2□□□□□ -1.74
MRPL40P36534 YJR038CYJR038C 363 nt4.2□□□□□ -1.74
MRPL40P36534 PIR3YKL163W 978 nt4.2□□□□□ -1.74
MRPL40P36534 VPS71YML041C 843 nt4.2□□□□□ -1.74
MRPL40P36534 YAR1YPL239W 603 nt4.2□□□□□ -1.74
MRPL40P36534 YPR059CYPR059C 387 nt4.2□□□□□ -1.74
MRPL40P36534 MMT1YMR177W 1533 nt4.2□□□□□ -1.74
MRPL40P36534 TRM13YOL125W 1431 nt4.2□□□□□ -1.74
MRPL40P36534 RNA14YMR061W 2034 nt4.19□□□□□ -1.74
MRPL40P36534 CAF16YFL028C 870 nt4.19□□□□□ -1.74
MRPL40P36534 ERV14YGL054C 417 nt4.19□□□□□ -1.74
MRPL40P36534 YIL152WYIL152W 708 nt4.19□□□□□ -1.74
MRPL40P36534 RDN5-1RDN5-1 121 nt4.19□□□□□ -1.74
MRPL40P36534 RDN5-6RDN5-6 121 nt4.19□□□□□ -1.74
MRPL40P36534 YDC1YPL087W 954 nt4.19□□□□□ -1.74
MRPL40P36534 SUA7YPR086W 1038 nt4.19□□□□□ -1.74
MRPL40P36534 VPS69YPR087W 321 nt4.19□□□□□ -1.74
MRPL40P36534 UBP10YNL186W 2379 nt4.19□□□□□ -1.74
MRPL40P36534 RAD54YGL163C 2697 nt4.18□□□□□ -1.74
MRPL40P36534 RSC58YLR033W 1509 nt4.18□□□□□ -1.74
MRPL40P36534 YDL228CYDL228C 642 nt4.18□□□□□ -1.74
MRPL40P36534 COS7YDL248W 1152 nt4.18□□□□□ -1.74
MRPL40P36534 RPL24AYGL031C 468 nt4.18□□□□□ -1.74
MRPL40P36534 COS5YJR161C 1152 nt4.18□□□□□ -1.74
MRPL40P36534 UTP11YKL099C 753 nt4.18□□□□□ -1.74
MRPL40P36534 YMR147WYMR147W 672 nt4.18□□□□□ -1.74
MRPL40P36534 NCE103YNL036W 666 nt4.18□□□□□ -1.74
MRPL40P36534 COA2YPL189C-A 207 nt4.18□□□□□ -1.74
MRPL40P36534 YGL188CYGL188C 174 nt4.17□□□□□ -1.74
MRPL40P36534 YGK3YOL128C 1128 nt4.17□□□□□ -1.74
MRPL40P36534 RET3YPL010W 570 nt4.17□□□□□ -1.74
MRPL40P36534 DBP3YGL078C 1572 nt4.17□□□□□ -1.74
MRPL40P36534 YRB30YGL164C 1323 nt4.17□□□□□ -1.74
MRPL40P36534 ECM22YLR228C 2445 nt4.16□□□□□ -1.74
MRPL40P36534 BUD8YLR353W 1812 nt4.16□□□□□ -1.74
MRPL40P36534 NPL4YBR170C 1743 nt4.16□□□□□ -1.74
MRPL40P36534 PRP9YDL030W 1593 nt4.16□□□□□ -1.74
MRPL40P36534 YDR056CYDR056C 618 nt4.16□□□□□ -1.74
MRPL40P36534 BUD16YEL029C 939 nt4.16□□□□□ -1.74
MRPL40P36534 COX2Q0250 756 nt4.16□□□□□ -1.74
MRPL40P36534 YIL021C-AYIL021C-A 270 nt4.16□□□□□ -1.74
MRPL40P36534 HEK2YBL032W 1146 nt4.16□□□□□ -1.74
MRPL40P36534 RKM4YDR257C 1485 nt4.16□□□□□ -1.74
MRPL40P36534 CDC14YFR028C 1656 nt4.16□□□□□ -1.74
MRPL40P36534 TRK1YJL129C 3708 nt4.16□□□□□ -1.74
MRPL40P36534 YLR345WYLR345W 1530 nt4.16□□□□□ -1.74
MRPL40P36534 RIA1YNL163C 3333 nt4.15□□□□□ -1.74
MRPL40P36534 SPO73YER046W 432 nt4.15□□□□□ -1.75
MRPL40P36534 CDC12YHR107C 1224 nt4.15□□□□□ -1.75
MRPL40P36534 SNL1YIL016W 480 nt4.15□□□□□ -1.75
MRPL40P36534 GLO3YER122C 1482 nt4.15□□□□□ -1.75
MRPL40P36534 NAM9YNL137C 1461 nt4.15□□□□□ -1.75
MRPL40P36534 BUD5YCR038C 1929 nt4.15□□□□□ -1.75
MRPL40P36534 KRE29YER038C 1395 nt4.14□□□□□ -1.75
MRPL40P36534 HOS2YGL194C 1359 nt4.14□□□□□ -1.75
MRPL40P36534 MRS3YJL133W 945 nt4.14□□□□□ -1.75
MRPL40P36534 DAN1YJR150C 897 nt4.14□□□□□ -1.75
MRPL40P36534 YAR030CYAR030C 342 nt4.14□□□□□ -1.75
MRPL40P36534 YLR428CYLR428C 345 nt4.14□□□□□ -1.75
MRPL40P36534 NHX1YDR456W 1902 nt4.14□□□□□ -1.75
MRPL40P36534 SIP1YDR422C 2448 nt4.14□□□□□ -1.75
MRPL40P36534 YNR065CYNR065C 3351 nt4.14□□□□□ -1.75
MRPL40P36534 PRD1YCL057W 2139 nt4.13□□□□□ -1.75
MRPL40P36534 EGT2YNL327W 3126 nt4.13□□□□□ -1.75
MRPL40P36534 SRO7YPR032W 3102 nt4.13□□□□□ -1.75
MRPL40P36534 UPC2YDR213W 2742 nt4.13□□□□□ -1.75
MRPL40P36534 RPO21YDL140C 5202 nt4.13□□□□□ -1.75
MRPL40P36534 YHB1YGR234W 1200 nt4.13□□□□□ -1.75
MRPL40P36534 ELF1YKL160W 438 nt4.13□□□□□ -1.75
MRPL40P36534 JLP1YLL057C 1239 nt4.13□□□□□ -1.75
MRPL40P36534 YNR061CYNR061C 660 nt4.13□□□□□ -1.75
MRPL40P36534 XKS1YGR194C 1803 nt4.13□□□□□ -1.75
MRPL40P36534 ALO1YML086C 1581 nt4.13□□□□□ -1.75
MRPL40P36534 NTA1YJR062C 1374 nt4.13□□□□□ -1.75
MRPL40P36534 VAC17YCL063W 1272 nt4.12□□□□□ -1.75
MRPL40P36534 PSR1YLL010C 1284 nt4.12□□□□□ -1.75
MRPL40P36534 PAM18YLR008C 507 nt4.12□□□□□ -1.75
MRPL40P36534 IES3YLR052W 753 nt4.12□□□□□ -1.75
MRPL40P36534 SUI1YNL244C 327 nt4.12□□□□□ -1.75
MRPL40P36534 FRM2YCL026C-A 582 nt4.12□□□□□ -1.75
MRPL40P36534 IOC2YLR095C 2439 nt4.12□□□□□ -1.75
MRPL40P36534 YCR023CYCR023C 1836 nt4.11□□□□□ -1.75
MRPL40P36534 ROK1YGL171W 1695 nt4.11□□□□□ -1.75
MRPL40P36534 PRP11YDL043C 801 nt4.11□□□□□ -1.75
MRPL40P36534 IRC22YEL001C 678 nt4.11□□□□□ -1.75
MRPL40P36534 MRP13YGR084C 1020 nt4.11□□□□□ -1.75
MRPL40P36534 IRC9YJL142C 393 nt4.11□□□□□ -1.75
MRPL40P36534 FOL3YMR113W 1284 nt4.11□□□□□ -1.75
MRPL40P36534 YPL025CYPL025C 558 nt4.11□□□□□ -1.75
MRPL40P36534 SPO1YNL012W 1896 nt4.11□□□□□ -1.75
MRPL40P36534 MUP3YHL036W 1641 nt4.1□□□□□ -1.75
MRPL40P36534 CYM1YDR430C 2970 nt4.1□□□□□ -1.75
MRPL40P36534 GPI10YGL142C 1851 nt4.1□□□□□ -1.75
MRPL40P36534 PIM1YBL022C 3402 nt4.1□□□□□ -1.75
MRPL40P36534 MST1YKL194C 1389 nt4.1□□□□□ -1.75
Retrieved 100 of 7,029 protein–RNA pairs in 102.8 ms