Protein–RNA interactions for Protein: O75400

PRPF40A, Pre-mRNA-processing factor 40 homolog A, humanhuman

Known RBP Predictions only

Length 957 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40AO75400 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
PRPF40AO75400 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC25.61■■□□□ 1.69
PRPF40AO75400 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC25.61■■□□□ 1.69
PRPF40AO75400 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC25.6■■□□□ 1.69
PRPF40AO75400 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC25.6■■□□□ 1.69
PRPF40AO75400 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC25.6■■□□□ 1.69
PRPF40AO75400 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC25.6■■□□□ 1.69
PRPF40AO75400 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
PRPF40AO75400 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
PRPF40AO75400 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC25.6■■□□□ 1.69
PRPF40AO75400 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC25.6■■□□□ 1.69
PRPF40AO75400 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
PRPF40AO75400 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC25.59■■□□□ 1.69
PRPF40AO75400 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC25.59■■□□□ 1.69
PRPF40AO75400 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
PRPF40AO75400 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC25.59■■□□□ 1.69
PRPF40AO75400 AC022616.5-201ENST00000518796 181 ntBASIC25.59■■□□□ 1.69
PRPF40AO75400 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
PRPF40AO75400 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC25.59■■□□□ 1.69
PRPF40AO75400 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
PRPF40AO75400 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC25.58■■□□□ 1.69
PRPF40AO75400 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC25.58■■□□□ 1.69
PRPF40AO75400 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC25.58■■□□□ 1.69
PRPF40AO75400 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
PRPF40AO75400 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC25.58■■□□□ 1.69
PRPF40AO75400 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
PRPF40AO75400 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC25.58■■□□□ 1.69
PRPF40AO75400 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC25.58■■□□□ 1.69
PRPF40AO75400 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
PRPF40AO75400 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
PRPF40AO75400 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC25.58■■□□□ 1.68
PRPF40AO75400 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC25.58■■□□□ 1.68
PRPF40AO75400 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC25.57■■□□□ 1.68
PRPF40AO75400 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC25.57■■□□□ 1.68
PRPF40AO75400 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC25.57■■□□□ 1.68
PRPF40AO75400 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC25.57■■□□□ 1.68
PRPF40AO75400 BEX3-202ENST00000372634 753 ntTSL 2 BASIC25.57■■□□□ 1.68
PRPF40AO75400 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC25.57■■□□□ 1.68
PRPF40AO75400 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC25.57■■□□□ 1.68
PRPF40AO75400 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC25.57■■□□□ 1.68
PRPF40AO75400 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC25.57■■□□□ 1.68
PRPF40AO75400 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
PRPF40AO75400 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC25.57■■□□□ 1.68
PRPF40AO75400 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
PRPF40AO75400 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
PRPF40AO75400 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC25.56■■□□□ 1.68
PRPF40AO75400 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC25.56■■□□□ 1.68
PRPF40AO75400 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
PRPF40AO75400 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC25.56■■□□□ 1.68
PRPF40AO75400 PVT1_1.1-201ENST00000615125 194 ntBASIC25.56■■□□□ 1.68
PRPF40AO75400 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
PRPF40AO75400 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC25.56■■□□□ 1.68
PRPF40AO75400 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
PRPF40AO75400 AF131216.4-201ENST00000638924 1588 ntBASIC25.56■■□□□ 1.68
PRPF40AO75400 KRT8P33-201ENST00000508125 1423 ntBASIC25.55■■□□□ 1.68
PRPF40AO75400 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC25.55■■□□□ 1.68
PRPF40AO75400 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
PRPF40AO75400 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
PRPF40AO75400 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
PRPF40AO75400 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC25.55■■□□□ 1.68
PRPF40AO75400 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC25.55■■□□□ 1.68
PRPF40AO75400 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC25.55■■□□□ 1.68
PRPF40AO75400 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
PRPF40AO75400 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
PRPF40AO75400 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC25.54■■□□□ 1.68
PRPF40AO75400 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
PRPF40AO75400 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
PRPF40AO75400 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC25.53■■□□□ 1.68
PRPF40AO75400 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
PRPF40AO75400 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC25.53■■□□□ 1.68
PRPF40AO75400 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC25.53■■□□□ 1.68
PRPF40AO75400 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.68
PRPF40AO75400 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC25.53■■□□□ 1.68
PRPF40AO75400 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
PRPF40AO75400 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC25.53■■□□□ 1.68
PRPF40AO75400 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.68
PRPF40AO75400 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC25.53■■□□□ 1.68
PRPF40AO75400 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
PRPF40AO75400 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC25.53■■□□□ 1.68
PRPF40AO75400 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC25.53■■□□□ 1.68
PRPF40AO75400 FAM99A-202ENST00000538190 1989 ntBASIC25.53■■□□□ 1.68
PRPF40AO75400 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC25.53■■□□□ 1.68
PRPF40AO75400 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
PRPF40AO75400 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC25.52■■□□□ 1.68
PRPF40AO75400 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
PRPF40AO75400 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
PRPF40AO75400 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC25.52■■□□□ 1.68
PRPF40AO75400 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC25.52■■□□□ 1.68
PRPF40AO75400 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC25.52■■□□□ 1.68
PRPF40AO75400 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC25.52■■□□□ 1.68
PRPF40AO75400 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
PRPF40AO75400 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
PRPF40AO75400 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
PRPF40AO75400 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC25.52■■□□□ 1.68
PRPF40AO75400 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC25.51■■□□□ 1.68
PRPF40AO75400 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC25.51■■□□□ 1.67
PRPF40AO75400 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC25.51■■□□□ 1.67
PRPF40AO75400 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC25.51■■□□□ 1.67
PRPF40AO75400 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC25.51■■□□□ 1.67
PRPF40AO75400 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms