Protein–RNA interactions for Protein: J3KQ70

INO80B-WBP1, HCG2039827, isoform CRA_e, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
INO80B-WBP1J3KQ70 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
INO80B-WBP1J3KQ70 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
INO80B-WBP1J3KQ70 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
INO80B-WBP1J3KQ70 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
INO80B-WBP1J3KQ70 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC24.21■■□□□ 1.47
INO80B-WBP1J3KQ70 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC24.21■■□□□ 1.47
INO80B-WBP1J3KQ70 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
INO80B-WBP1J3KQ70 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC24.21■■□□□ 1.47
INO80B-WBP1J3KQ70 AC026271.2-201ENST00000428091 497 ntBASIC24.21■■□□□ 1.47
INO80B-WBP1J3KQ70 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC24.21■■□□□ 1.47
INO80B-WBP1J3KQ70 AP005435.1-201ENST00000529293 1178 ntBASIC24.21■■□□□ 1.47
INO80B-WBP1J3KQ70 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
INO80B-WBP1J3KQ70 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
INO80B-WBP1J3KQ70 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC24.21■■□□□ 1.47
INO80B-WBP1J3KQ70 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC24.2■■□□□ 1.47
INO80B-WBP1J3KQ70 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
INO80B-WBP1J3KQ70 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
INO80B-WBP1J3KQ70 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC24.2■■□□□ 1.47
INO80B-WBP1J3KQ70 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC24.2■■□□□ 1.46
INO80B-WBP1J3KQ70 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC24.2■■□□□ 1.46
INO80B-WBP1J3KQ70 JTB-203ENST00000368589 1216 ntTSL 2 BASIC24.2■■□□□ 1.46
INO80B-WBP1J3KQ70 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC24.2■■□□□ 1.46
INO80B-WBP1J3KQ70 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.46
INO80B-WBP1J3KQ70 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.46
INO80B-WBP1J3KQ70 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC24.2■■□□□ 1.46
INO80B-WBP1J3KQ70 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
INO80B-WBP1J3KQ70 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC24.19■■□□□ 1.46
INO80B-WBP1J3KQ70 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC24.19■■□□□ 1.46
INO80B-WBP1J3KQ70 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC24.19■■□□□ 1.46
INO80B-WBP1J3KQ70 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC24.19■■□□□ 1.46
INO80B-WBP1J3KQ70 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC24.19■■□□□ 1.46
INO80B-WBP1J3KQ70 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
INO80B-WBP1J3KQ70 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC24.19■■□□□ 1.46
INO80B-WBP1J3KQ70 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
INO80B-WBP1J3KQ70 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC24.19■■□□□ 1.46
INO80B-WBP1J3KQ70 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC24.18■■□□□ 1.46
INO80B-WBP1J3KQ70 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
INO80B-WBP1J3KQ70 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC24.18■■□□□ 1.46
INO80B-WBP1J3KQ70 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC24.18■■□□□ 1.46
INO80B-WBP1J3KQ70 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
INO80B-WBP1J3KQ70 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
INO80B-WBP1J3KQ70 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
INO80B-WBP1J3KQ70 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC24.18■■□□□ 1.46
INO80B-WBP1J3KQ70 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC24.18■■□□□ 1.46
INO80B-WBP1J3KQ70 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC24.18■■□□□ 1.46
INO80B-WBP1J3KQ70 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
INO80B-WBP1J3KQ70 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
INO80B-WBP1J3KQ70 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
INO80B-WBP1J3KQ70 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC24.17■■□□□ 1.46
INO80B-WBP1J3KQ70 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC24.17■■□□□ 1.46
INO80B-WBP1J3KQ70 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC24.17■■□□□ 1.46
INO80B-WBP1J3KQ70 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC24.17■■□□□ 1.46
INO80B-WBP1J3KQ70 MIR572-201ENST00000384983 95 ntBASIC24.17■■□□□ 1.46
INO80B-WBP1J3KQ70 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
INO80B-WBP1J3KQ70 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
INO80B-WBP1J3KQ70 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC24.16■■□□□ 1.46
INO80B-WBP1J3KQ70 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
INO80B-WBP1J3KQ70 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
INO80B-WBP1J3KQ70 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC24.16■■□□□ 1.46
INO80B-WBP1J3KQ70 NME4-202ENST00000382940 766 ntTSL 3 BASIC24.16■■□□□ 1.46
INO80B-WBP1J3KQ70 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC24.16■■□□□ 1.46
INO80B-WBP1J3KQ70 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC24.16■■□□□ 1.46
INO80B-WBP1J3KQ70 NME4-211ENST00000620944 1193 ntTSL 2 BASIC24.16■■□□□ 1.46
INO80B-WBP1J3KQ70 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
INO80B-WBP1J3KQ70 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
INO80B-WBP1J3KQ70 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC24.16■■□□□ 1.46
INO80B-WBP1J3KQ70 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
INO80B-WBP1J3KQ70 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC24.15■■□□□ 1.46
INO80B-WBP1J3KQ70 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC24.15■■□□□ 1.46
INO80B-WBP1J3KQ70 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC24.15■■□□□ 1.46
INO80B-WBP1J3KQ70 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
INO80B-WBP1J3KQ70 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
INO80B-WBP1J3KQ70 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC24.15■■□□□ 1.46
INO80B-WBP1J3KQ70 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC24.15■■□□□ 1.46
INO80B-WBP1J3KQ70 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC24.15■■□□□ 1.46
INO80B-WBP1J3KQ70 THRA-202ENST00000394121 2260 ntTSL 2 BASIC24.15■■□□□ 1.46
INO80B-WBP1J3KQ70 EI24-211ENST00000534546 1544 ntTSL 2 BASIC24.15■■□□□ 1.46
INO80B-WBP1J3KQ70 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
INO80B-WBP1J3KQ70 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC24.14■■□□□ 1.46
INO80B-WBP1J3KQ70 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
INO80B-WBP1J3KQ70 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
INO80B-WBP1J3KQ70 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
INO80B-WBP1J3KQ70 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
INO80B-WBP1J3KQ70 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
INO80B-WBP1J3KQ70 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC24.14■■□□□ 1.45
INO80B-WBP1J3KQ70 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
INO80B-WBP1J3KQ70 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.45
INO80B-WBP1J3KQ70 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
INO80B-WBP1J3KQ70 SP2-202ENST00000613139 908 ntTSL 5 BASIC24.14■■□□□ 1.45
INO80B-WBP1J3KQ70 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
INO80B-WBP1J3KQ70 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC24.14■■□□□ 1.45
INO80B-WBP1J3KQ70 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
INO80B-WBP1J3KQ70 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
INO80B-WBP1J3KQ70 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
INO80B-WBP1J3KQ70 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
INO80B-WBP1J3KQ70 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC24.13■■□□□ 1.45
INO80B-WBP1J3KQ70 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
INO80B-WBP1J3KQ70 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC24.13■■□□□ 1.45
INO80B-WBP1J3KQ70 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC24.13■■□□□ 1.45
INO80B-WBP1J3KQ70 AK1-201ENST00000223836 736 ntTSL 3 BASIC24.13■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms