Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC20.77■□□□□ 0.92
TRBV5-3A0A0A0MS03 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRBV5-3A0A0A0MS03 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
TRBV5-3A0A0A0MS03 LINC01960-201ENST00000563759 1884 ntBASIC20.77■□□□□ 0.92
TRBV5-3A0A0A0MS03 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.77■□□□□ 0.91
TRBV5-3A0A0A0MS03 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
TRBV5-3A0A0A0MS03 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
TRBV5-3A0A0A0MS03 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
TRBV5-3A0A0A0MS03 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
TRBV5-3A0A0A0MS03 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
TRBV5-3A0A0A0MS03 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRBV5-3A0A0A0MS03 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRBV5-3A0A0A0MS03 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.76■□□□□ 0.91
TRBV5-3A0A0A0MS03 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TRBV5-3A0A0A0MS03 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRBV5-3A0A0A0MS03 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRBV5-3A0A0A0MS03 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRBV5-3A0A0A0MS03 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRBV5-3A0A0A0MS03 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRBV5-3A0A0A0MS03 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC20.76■□□□□ 0.91
TRBV5-3A0A0A0MS03 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC20.76■□□□□ 0.91
TRBV5-3A0A0A0MS03 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC20.76■□□□□ 0.91
TRBV5-3A0A0A0MS03 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
TRBV5-3A0A0A0MS03 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TRBV5-3A0A0A0MS03 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.76■□□□□ 0.91
TRBV5-3A0A0A0MS03 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.76■□□□□ 0.91
TRBV5-3A0A0A0MS03 AL137060.1-201ENST00000618151 2648 ntBASIC20.76■□□□□ 0.91
TRBV5-3A0A0A0MS03 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRBV5-3A0A0A0MS03 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
TRBV5-3A0A0A0MS03 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRBV5-3A0A0A0MS03 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
TRBV5-3A0A0A0MS03 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
TRBV5-3A0A0A0MS03 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRBV5-3A0A0A0MS03 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRBV5-3A0A0A0MS03 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRBV5-3A0A0A0MS03 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
TRBV5-3A0A0A0MS03 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.75■□□□□ 0.91
TRBV5-3A0A0A0MS03 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRBV5-3A0A0A0MS03 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRBV5-3A0A0A0MS03 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.75■□□□□ 0.91
TRBV5-3A0A0A0MS03 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRBV5-3A0A0A0MS03 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRBV5-3A0A0A0MS03 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC20.75■□□□□ 0.91
TRBV5-3A0A0A0MS03 AC009086.3-201ENST00000623486 1008 ntBASIC20.75■□□□□ 0.91
TRBV5-3A0A0A0MS03 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TRBV5-3A0A0A0MS03 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.75■□□□□ 0.91
TRBV5-3A0A0A0MS03 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.75■□□□□ 0.91
TRBV5-3A0A0A0MS03 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRBV5-3A0A0A0MS03 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.74■□□□□ 0.91
TRBV5-3A0A0A0MS03 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRBV5-3A0A0A0MS03 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC20.74■□□□□ 0.91
TRBV5-3A0A0A0MS03 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRBV5-3A0A0A0MS03 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TRBV5-3A0A0A0MS03 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.74■□□□□ 0.91
TRBV5-3A0A0A0MS03 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.74■□□□□ 0.91
TRBV5-3A0A0A0MS03 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRBV5-3A0A0A0MS03 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC20.74■□□□□ 0.91
TRBV5-3A0A0A0MS03 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
TRBV5-3A0A0A0MS03 AL031848.2-201ENST00000607670 837 ntBASIC20.74■□□□□ 0.91
TRBV5-3A0A0A0MS03 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRBV5-3A0A0A0MS03 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TRBV5-3A0A0A0MS03 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.74■□□□□ 0.91
TRBV5-3A0A0A0MS03 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRBV5-3A0A0A0MS03 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.74■□□□□ 0.91
TRBV5-3A0A0A0MS03 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.73■□□□□ 0.91
TRBV5-3A0A0A0MS03 AC010542.4-201ENST00000563151 1910 ntBASIC20.73■□□□□ 0.91
TRBV5-3A0A0A0MS03 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC20.73■□□□□ 0.91
TRBV5-3A0A0A0MS03 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.73■□□□□ 0.91
TRBV5-3A0A0A0MS03 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRBV5-3A0A0A0MS03 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRBV5-3A0A0A0MS03 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC20.73■□□□□ 0.91
TRBV5-3A0A0A0MS03 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.73■□□□□ 0.91
TRBV5-3A0A0A0MS03 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRBV5-3A0A0A0MS03 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.73■□□□□ 0.91
TRBV5-3A0A0A0MS03 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TRBV5-3A0A0A0MS03 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC20.73■□□□□ 0.91
TRBV5-3A0A0A0MS03 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TRBV5-3A0A0A0MS03 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TRBV5-3A0A0A0MS03 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRBV5-3A0A0A0MS03 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRBV5-3A0A0A0MS03 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
TRBV5-3A0A0A0MS03 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TRBV5-3A0A0A0MS03 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
TRBV5-3A0A0A0MS03 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TRBV5-3A0A0A0MS03 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.71■□□□□ 0.91
TRBV5-3A0A0A0MS03 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRBV5-3A0A0A0MS03 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
TRBV5-3A0A0A0MS03 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TRBV5-3A0A0A0MS03 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC20.71■□□□□ 0.91
TRBV5-3A0A0A0MS03 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRBV5-3A0A0A0MS03 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC20.71■□□□□ 0.91
TRBV5-3A0A0A0MS03 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.71■□□□□ 0.91
TRBV5-3A0A0A0MS03 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRBV5-3A0A0A0MS03 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRBV5-3A0A0A0MS03 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.71■□□□□ 0.91
TRBV5-3A0A0A0MS03 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRBV5-3A0A0A0MS03 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TRBV5-3A0A0A0MS03 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
TRBV5-3A0A0A0MS03 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.7■□□□□ 0.9
TRBV5-3A0A0A0MS03 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms