Protein–RNA interactions for Protein: S4R434

TMEM56-RWDD3, TMEM56-RWDD3 readthrough, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-RWDD3S4R434 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TMEM56-RWDD3S4R434 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TMEM56-RWDD3S4R434 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TMEM56-RWDD3S4R434 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC18.1■□□□□ 0.49
TMEM56-RWDD3S4R434 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC18.1■□□□□ 0.49
TMEM56-RWDD3S4R434 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC18.1■□□□□ 0.49
TMEM56-RWDD3S4R434 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TMEM56-RWDD3S4R434 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
TMEM56-RWDD3S4R434 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC18.1■□□□□ 0.49
TMEM56-RWDD3S4R434 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC18.1■□□□□ 0.49
TMEM56-RWDD3S4R434 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TMEM56-RWDD3S4R434 AC026310.3-201ENST00000625186 2373 ntBASIC18.1■□□□□ 0.49
TMEM56-RWDD3S4R434 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
TMEM56-RWDD3S4R434 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
TMEM56-RWDD3S4R434 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TMEM56-RWDD3S4R434 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TMEM56-RWDD3S4R434 AC144652.1-201ENST00000609974 1624 ntBASIC18.09■□□□□ 0.49
TMEM56-RWDD3S4R434 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TMEM56-RWDD3S4R434 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
TMEM56-RWDD3S4R434 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
TMEM56-RWDD3S4R434 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TMEM56-RWDD3S4R434 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TMEM56-RWDD3S4R434 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TMEM56-RWDD3S4R434 MTX2-204ENST00000443241 799 ntTSL 3 BASIC18.09■□□□□ 0.49
TMEM56-RWDD3S4R434 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC18.09■□□□□ 0.49
TMEM56-RWDD3S4R434 AC129492.7-201ENST00000622992 756 ntBASIC18.09■□□□□ 0.49
TMEM56-RWDD3S4R434 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TMEM56-RWDD3S4R434 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TMEM56-RWDD3S4R434 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC18.08■□□□□ 0.49
TMEM56-RWDD3S4R434 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TMEM56-RWDD3S4R434 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TMEM56-RWDD3S4R434 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC18.08■□□□□ 0.48
TMEM56-RWDD3S4R434 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TMEM56-RWDD3S4R434 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TMEM56-RWDD3S4R434 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC18.08■□□□□ 0.48
TMEM56-RWDD3S4R434 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
TMEM56-RWDD3S4R434 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
TMEM56-RWDD3S4R434 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TMEM56-RWDD3S4R434 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC18.07■□□□□ 0.48
TMEM56-RWDD3S4R434 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TMEM56-RWDD3S4R434 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TMEM56-RWDD3S4R434 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
TMEM56-RWDD3S4R434 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TMEM56-RWDD3S4R434 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
TMEM56-RWDD3S4R434 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC18.07■□□□□ 0.48
TMEM56-RWDD3S4R434 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
TMEM56-RWDD3S4R434 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
TMEM56-RWDD3S4R434 AC120024.1-201ENST00000562672 995 ntBASIC18.07■□□□□ 0.48
TMEM56-RWDD3S4R434 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TMEM56-RWDD3S4R434 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TMEM56-RWDD3S4R434 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
TMEM56-RWDD3S4R434 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TMEM56-RWDD3S4R434 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TMEM56-RWDD3S4R434 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
TMEM56-RWDD3S4R434 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TMEM56-RWDD3S4R434 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC18.06■□□□□ 0.48
TMEM56-RWDD3S4R434 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
TMEM56-RWDD3S4R434 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC18.06■□□□□ 0.48
TMEM56-RWDD3S4R434 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC18.06■□□□□ 0.48
TMEM56-RWDD3S4R434 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TMEM56-RWDD3S4R434 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
TMEM56-RWDD3S4R434 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC18.06■□□□□ 0.48
TMEM56-RWDD3S4R434 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC18.06■□□□□ 0.48
TMEM56-RWDD3S4R434 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TMEM56-RWDD3S4R434 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TMEM56-RWDD3S4R434 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC18.06■□□□□ 0.48
TMEM56-RWDD3S4R434 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC18.06■□□□□ 0.48
TMEM56-RWDD3S4R434 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TMEM56-RWDD3S4R434 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
TMEM56-RWDD3S4R434 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
TMEM56-RWDD3S4R434 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TMEM56-RWDD3S4R434 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TMEM56-RWDD3S4R434 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TMEM56-RWDD3S4R434 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC18.05■□□□□ 0.48
TMEM56-RWDD3S4R434 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
TMEM56-RWDD3S4R434 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC18.05■□□□□ 0.48
TMEM56-RWDD3S4R434 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TMEM56-RWDD3S4R434 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
TMEM56-RWDD3S4R434 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TMEM56-RWDD3S4R434 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TMEM56-RWDD3S4R434 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC18.05■□□□□ 0.48
TMEM56-RWDD3S4R434 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TMEM56-RWDD3S4R434 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
TMEM56-RWDD3S4R434 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TMEM56-RWDD3S4R434 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TMEM56-RWDD3S4R434 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TMEM56-RWDD3S4R434 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TMEM56-RWDD3S4R434 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
TMEM56-RWDD3S4R434 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TMEM56-RWDD3S4R434 AC010542.4-201ENST00000563151 1910 ntBASIC18.04■□□□□ 0.48
TMEM56-RWDD3S4R434 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
TMEM56-RWDD3S4R434 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC18.04■□□□□ 0.48
TMEM56-RWDD3S4R434 ABHD17AP3-201ENST00000503096 1137 ntBASIC18.04■□□□□ 0.48
TMEM56-RWDD3S4R434 FAM99A-202ENST00000538190 1989 ntBASIC18.04■□□□□ 0.48
TMEM56-RWDD3S4R434 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TMEM56-RWDD3S4R434 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC18.04■□□□□ 0.48
TMEM56-RWDD3S4R434 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
TMEM56-RWDD3S4R434 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TMEM56-RWDD3S4R434 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
TMEM56-RWDD3S4R434 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms