Protein–RNA interactions for Protein: Q9Y5I7

CLDN16, Claudin-16, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN16Q9Y5I7 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLDN16Q9Y5I7 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLDN16Q9Y5I7 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.72■□□□□ 0.91
CLDN16Q9Y5I7 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CLDN16Q9Y5I7 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLDN16Q9Y5I7 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC20.72■□□□□ 0.91
CLDN16Q9Y5I7 MIR939-201ENST00000401314 82 ntBASIC20.72■□□□□ 0.91
CLDN16Q9Y5I7 OR2I1P-207ENST00000453522 948 ntBASIC20.72■□□□□ 0.91
CLDN16Q9Y5I7 AC010525.1-201ENST00000585559 441 ntBASIC20.72■□□□□ 0.91
CLDN16Q9Y5I7 AL355001.2-201ENST00000620617 1191 ntBASIC20.72■□□□□ 0.91
CLDN16Q9Y5I7 AL136967.2-201ENST00000623968 743 ntBASIC20.72■□□□□ 0.91
CLDN16Q9Y5I7 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CLDN16Q9Y5I7 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLDN16Q9Y5I7 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLDN16Q9Y5I7 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLDN16Q9Y5I7 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLDN16Q9Y5I7 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLDN16Q9Y5I7 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CLDN16Q9Y5I7 SLC47A1P1-202ENST00000449666 945 ntBASIC20.71■□□□□ 0.91
CLDN16Q9Y5I7 AF213884.3-201ENST00000563833 479 ntBASIC20.71■□□□□ 0.91
CLDN16Q9Y5I7 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
CLDN16Q9Y5I7 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CLDN16Q9Y5I7 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLDN16Q9Y5I7 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLDN16Q9Y5I7 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLDN16Q9Y5I7 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
CLDN16Q9Y5I7 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.71■□□□□ 0.91
CLDN16Q9Y5I7 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLDN16Q9Y5I7 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
CLDN16Q9Y5I7 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.91
CLDN16Q9Y5I7 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLDN16Q9Y5I7 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLDN16Q9Y5I7 STX4-202ENST00000394998 1498 ntTSL 2 BASIC20.7■□□□□ 0.9
CLDN16Q9Y5I7 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLDN16Q9Y5I7 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
CLDN16Q9Y5I7 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CLDN16Q9Y5I7 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC20.7■□□□□ 0.9
CLDN16Q9Y5I7 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC20.7■□□□□ 0.9
CLDN16Q9Y5I7 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC20.7■□□□□ 0.9
CLDN16Q9Y5I7 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.7■□□□□ 0.9
CLDN16Q9Y5I7 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CLDN16Q9Y5I7 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.7■□□□□ 0.9
CLDN16Q9Y5I7 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CLDN16Q9Y5I7 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
CLDN16Q9Y5I7 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
CLDN16Q9Y5I7 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLDN16Q9Y5I7 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
CLDN16Q9Y5I7 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLDN16Q9Y5I7 BX842568.3-201ENST00000418104 571 ntBASIC20.69■□□□□ 0.9
CLDN16Q9Y5I7 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLDN16Q9Y5I7 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC20.69■□□□□ 0.9
CLDN16Q9Y5I7 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC20.69■□□□□ 0.9
CLDN16Q9Y5I7 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC20.69■□□□□ 0.9
CLDN16Q9Y5I7 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CLDN16Q9Y5I7 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.69■□□□□ 0.9
CLDN16Q9Y5I7 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
CLDN16Q9Y5I7 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
CLDN16Q9Y5I7 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.69■□□□□ 0.9
CLDN16Q9Y5I7 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.69■□□□□ 0.9
CLDN16Q9Y5I7 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.69■□□□□ 0.9
CLDN16Q9Y5I7 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.68■□□□□ 0.9
CLDN16Q9Y5I7 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
CLDN16Q9Y5I7 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
CLDN16Q9Y5I7 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLDN16Q9Y5I7 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLDN16Q9Y5I7 C9orf163-202ENST00000624034 2573 ntBASIC20.67■□□□□ 0.9
CLDN16Q9Y5I7 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.67■□□□□ 0.9
CLDN16Q9Y5I7 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLDN16Q9Y5I7 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLDN16Q9Y5I7 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CLDN16Q9Y5I7 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
CLDN16Q9Y5I7 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLDN16Q9Y5I7 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.67■□□□□ 0.9
CLDN16Q9Y5I7 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLDN16Q9Y5I7 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLDN16Q9Y5I7 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC20.67■□□□□ 0.9
CLDN16Q9Y5I7 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CLDN16Q9Y5I7 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLDN16Q9Y5I7 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLDN16Q9Y5I7 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
CLDN16Q9Y5I7 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
CLDN16Q9Y5I7 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.66■□□□□ 0.9
CLDN16Q9Y5I7 RARA-203ENST00000394086 2008 ntTSL 2 BASIC20.66■□□□□ 0.9
CLDN16Q9Y5I7 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.66■□□□□ 0.9
CLDN16Q9Y5I7 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
CLDN16Q9Y5I7 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.66■□□□□ 0.9
CLDN16Q9Y5I7 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.66■□□□□ 0.9
CLDN16Q9Y5I7 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLDN16Q9Y5I7 AC233992.3-201ENST00000607491 485 ntBASIC20.66■□□□□ 0.9
CLDN16Q9Y5I7 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CLDN16Q9Y5I7 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLDN16Q9Y5I7 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLDN16Q9Y5I7 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLDN16Q9Y5I7 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.65■□□□□ 0.9
CLDN16Q9Y5I7 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.65■□□□□ 0.9
CLDN16Q9Y5I7 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.65■□□□□ 0.9
CLDN16Q9Y5I7 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
CLDN16Q9Y5I7 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLDN16Q9Y5I7 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CLDN16Q9Y5I7 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 125.3 ms