Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
UPF3BQ9BZI7 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC26.4■■□□□ 1.82
UPF3BQ9BZI7 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
UPF3BQ9BZI7 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
UPF3BQ9BZI7 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC26.4■■□□□ 1.82
UPF3BQ9BZI7 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
UPF3BQ9BZI7 LINC00526-201ENST00000581067 1875 ntBASIC26.4■■□□□ 1.82
UPF3BQ9BZI7 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC26.39■■□□□ 1.82
UPF3BQ9BZI7 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC26.39■■□□□ 1.82
UPF3BQ9BZI7 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC26.39■■□□□ 1.82
UPF3BQ9BZI7 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
UPF3BQ9BZI7 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
UPF3BQ9BZI7 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC26.39■■□□□ 1.82
UPF3BQ9BZI7 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
UPF3BQ9BZI7 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
UPF3BQ9BZI7 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
UPF3BQ9BZI7 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC26.38■■□□□ 1.81
UPF3BQ9BZI7 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC26.38■■□□□ 1.81
UPF3BQ9BZI7 NKILA-201ENST00000613231 537 ntTSL 4 BASIC26.38■■□□□ 1.81
UPF3BQ9BZI7 EXOG-217ENST00000630638 197 ntTSL 5 BASIC26.38■■□□□ 1.81
UPF3BQ9BZI7 ECEL1P1-201ENST00000373592 1742 ntBASIC26.38■■□□□ 1.81
UPF3BQ9BZI7 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
UPF3BQ9BZI7 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC26.38■■□□□ 1.81
UPF3BQ9BZI7 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC26.37■■□□□ 1.81
UPF3BQ9BZI7 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
UPF3BQ9BZI7 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
UPF3BQ9BZI7 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC26.37■■□□□ 1.81
UPF3BQ9BZI7 TFPT-201ENST00000391757 774 ntTSL 5 BASIC26.37■■□□□ 1.81
UPF3BQ9BZI7 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC26.37■■□□□ 1.81
UPF3BQ9BZI7 UNC93B8-201ENST00000511903 705 ntBASIC26.37■■□□□ 1.81
UPF3BQ9BZI7 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC26.37■■□□□ 1.81
UPF3BQ9BZI7 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
UPF3BQ9BZI7 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC26.36■■□□□ 1.81
UPF3BQ9BZI7 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC26.36■■□□□ 1.81
UPF3BQ9BZI7 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC26.36■■□□□ 1.81
UPF3BQ9BZI7 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC26.36■■□□□ 1.81
UPF3BQ9BZI7 CREM-229ENST00000474362 1030 ntTSL 2 BASIC26.36■■□□□ 1.81
UPF3BQ9BZI7 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC26.36■■□□□ 1.81
UPF3BQ9BZI7 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC26.35■■□□□ 1.81
UPF3BQ9BZI7 ESRRAP2-201ENST00000418437 1549 ntBASIC26.35■■□□□ 1.81
UPF3BQ9BZI7 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
UPF3BQ9BZI7 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC26.35■■□□□ 1.81
UPF3BQ9BZI7 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC26.35■■□□□ 1.81
UPF3BQ9BZI7 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
UPF3BQ9BZI7 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC26.35■■□□□ 1.81
UPF3BQ9BZI7 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
UPF3BQ9BZI7 AC087742.1-201ENST00000575880 1738 ntBASIC26.35■■□□□ 1.81
UPF3BQ9BZI7 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
UPF3BQ9BZI7 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
UPF3BQ9BZI7 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC26.35■■□□□ 1.81
UPF3BQ9BZI7 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC26.35■■□□□ 1.81
UPF3BQ9BZI7 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC26.35■■□□□ 1.81
UPF3BQ9BZI7 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC26.35■■□□□ 1.81
UPF3BQ9BZI7 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC26.34■■□□□ 1.81
UPF3BQ9BZI7 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
UPF3BQ9BZI7 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
UPF3BQ9BZI7 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC26.34■■□□□ 1.81
UPF3BQ9BZI7 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC26.34■■□□□ 1.81
UPF3BQ9BZI7 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
UPF3BQ9BZI7 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
UPF3BQ9BZI7 FP325331.1-202ENST00000623531 1380 ntBASIC26.33■■□□□ 1.81
UPF3BQ9BZI7 AC080038.3-201ENST00000623346 1952 ntBASIC26.33■■□□□ 1.81
UPF3BQ9BZI7 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC26.33■■□□□ 1.81
UPF3BQ9BZI7 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
UPF3BQ9BZI7 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
UPF3BQ9BZI7 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
UPF3BQ9BZI7 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC26.33■■□□□ 1.81
UPF3BQ9BZI7 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
UPF3BQ9BZI7 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
UPF3BQ9BZI7 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
UPF3BQ9BZI7 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC26.33■■□□□ 1.81
UPF3BQ9BZI7 GUSBP5-201ENST00000418136 578 ntBASIC26.33■■□□□ 1.81
UPF3BQ9BZI7 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC26.33■■□□□ 1.81
UPF3BQ9BZI7 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC26.33■■□□□ 1.81
UPF3BQ9BZI7 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
UPF3BQ9BZI7 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
UPF3BQ9BZI7 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
UPF3BQ9BZI7 AC127496.7-201ENST00000625110 1798 ntBASIC26.33■■□□□ 1.8
UPF3BQ9BZI7 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC26.32■■□□□ 1.8
UPF3BQ9BZI7 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
UPF3BQ9BZI7 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
UPF3BQ9BZI7 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
UPF3BQ9BZI7 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC26.32■■□□□ 1.8
UPF3BQ9BZI7 AC242852.2-201ENST00000615738 1807 ntBASIC26.32■■□□□ 1.8
UPF3BQ9BZI7 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
UPF3BQ9BZI7 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
UPF3BQ9BZI7 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC26.31■■□□□ 1.8
UPF3BQ9BZI7 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
UPF3BQ9BZI7 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
UPF3BQ9BZI7 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
UPF3BQ9BZI7 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
UPF3BQ9BZI7 OR2A1-AS1-204ENST00000470435 602 ntBASIC26.31■■□□□ 1.8
UPF3BQ9BZI7 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
UPF3BQ9BZI7 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC26.31■■□□□ 1.8
UPF3BQ9BZI7 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC26.31■■□□□ 1.8
UPF3BQ9BZI7 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
UPF3BQ9BZI7 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC26.3■■□□□ 1.8
UPF3BQ9BZI7 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
UPF3BQ9BZI7 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC26.3■■□□□ 1.8
UPF3BQ9BZI7 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms