Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SNX18Q96RF0 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SNX18Q96RF0 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SNX18Q96RF0 RNF165-205ENST00000588679 2904 ntBASIC20.05■□□□□ 0.8
SNX18Q96RF0 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SNX18Q96RF0 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
SNX18Q96RF0 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
SNX18Q96RF0 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.04■□□□□ 0.8
SNX18Q96RF0 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SNX18Q96RF0 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SNX18Q96RF0 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SNX18Q96RF0 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SNX18Q96RF0 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SNX18Q96RF0 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SNX18Q96RF0 AC239859.2-201ENST00000444165 318 ntBASIC20.04■□□□□ 0.8
SNX18Q96RF0 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SNX18Q96RF0 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SNX18Q96RF0 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
SNX18Q96RF0 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SNX18Q96RF0 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SNX18Q96RF0 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SNX18Q96RF0 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.03■□□□□ 0.8
SNX18Q96RF0 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SNX18Q96RF0 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SNX18Q96RF0 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SNX18Q96RF0 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.03■□□□□ 0.8
SNX18Q96RF0 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC20.03■□□□□ 0.8
SNX18Q96RF0 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC20.03■□□□□ 0.8
SNX18Q96RF0 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC20.03■□□□□ 0.8
SNX18Q96RF0 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.03■□□□□ 0.8
SNX18Q96RF0 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.03■□□□□ 0.8
SNX18Q96RF0 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.03■□□□□ 0.8
SNX18Q96RF0 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SNX18Q96RF0 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SNX18Q96RF0 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SNX18Q96RF0 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.02■□□□□ 0.8
SNX18Q96RF0 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
SNX18Q96RF0 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.02■□□□□ 0.8
SNX18Q96RF0 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
SNX18Q96RF0 AL137060.1-201ENST00000618151 2648 ntBASIC20.02■□□□□ 0.8
SNX18Q96RF0 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC20.02■□□□□ 0.8
SNX18Q96RF0 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC20.02■□□□□ 0.8
SNX18Q96RF0 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SNX18Q96RF0 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.02■□□□□ 0.8
SNX18Q96RF0 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SNX18Q96RF0 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SNX18Q96RF0 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.79
SNX18Q96RF0 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.02■□□□□ 0.79
SNX18Q96RF0 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
SNX18Q96RF0 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.01■□□□□ 0.79
SNX18Q96RF0 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SNX18Q96RF0 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
SNX18Q96RF0 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC20.01■□□□□ 0.79
SNX18Q96RF0 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC20.01■□□□□ 0.79
SNX18Q96RF0 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SNX18Q96RF0 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC20.01■□□□□ 0.79
SNX18Q96RF0 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SNX18Q96RF0 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SNX18Q96RF0 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SNX18Q96RF0 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SNX18Q96RF0 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
SNX18Q96RF0 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SNX18Q96RF0 SENP5-202ENST00000419026 973 ntTSL 3 BASIC20■□□□□ 0.79
SNX18Q96RF0 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
SNX18Q96RF0 MIR6722-201ENST00000617286 78 ntBASIC20■□□□□ 0.79
SNX18Q96RF0 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC20■□□□□ 0.79
SNX18Q96RF0 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
SNX18Q96RF0 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
SNX18Q96RF0 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SNX18Q96RF0 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC19.99■□□□□ 0.79
SNX18Q96RF0 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC19.99■□□□□ 0.79
SNX18Q96RF0 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SNX18Q96RF0 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SNX18Q96RF0 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SNX18Q96RF0 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
SNX18Q96RF0 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC19.99■□□□□ 0.79
SNX18Q96RF0 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC19.99■□□□□ 0.79
SNX18Q96RF0 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC19.99■□□□□ 0.79
SNX18Q96RF0 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SNX18Q96RF0 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
SNX18Q96RF0 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC19.99■□□□□ 0.79
SNX18Q96RF0 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SNX18Q96RF0 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SNX18Q96RF0 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SNX18Q96RF0 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SNX18Q96RF0 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SNX18Q96RF0 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
SNX18Q96RF0 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC19.98■□□□□ 0.79
SNX18Q96RF0 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SNX18Q96RF0 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
SNX18Q96RF0 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.98■□□□□ 0.79
SNX18Q96RF0 AC092667.1-201ENST00000434301 2586 ntBASIC19.98■□□□□ 0.79
SNX18Q96RF0 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC19.98■□□□□ 0.79
SNX18Q96RF0 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SNX18Q96RF0 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SNX18Q96RF0 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.98■□□□□ 0.79
SNX18Q96RF0 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.98■□□□□ 0.79
SNX18Q96RF0 ESRRAP2-201ENST00000418437 1549 ntBASIC19.97■□□□□ 0.79
SNX18Q96RF0 AC021242.3-201ENST00000607598 1377 ntBASIC19.97■□□□□ 0.79
SNX18Q96RF0 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms