Protein–RNA interactions for Protein: Q96I24

FUBP3, Far upstream element-binding protein 3, humanhuman

Known RBP eCLIP

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FUBP3Q96I24 GCA-203ENST00000429691 824 ntTSL 3 BASIC5.01□□□□□ -1.615e-7■■□□□ 13
FUBP3Q96I24 GCA-202ENST00000414723 655 ntTSL 33.93□□□□□ -1.785e-7■■□□□ 13
FUBP3Q96I24 CALU-202ENST00000449187 2438 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.262e-10■■□□□ 13
FUBP3Q96I24 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC7.79□□□□□ -1.162e-10■■□□□ 13
FUBP3Q96I24 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC16.75■□□□□ 0.276e-7■■□□□ 13
FUBP3Q96I24 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.066e-7■■□□□ 13
FUBP3Q96I24 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.443e-6■■□□□ 13
FUBP3Q96I24 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.793e-6■■□□□ 13
FUBP3Q96I24 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.782e-8■■□□□ 13
FUBP3Q96I24 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.044e-6■■□□□ 13
FUBP3Q96I24 LONRF1-205ENST00000526680 2841 ntTSL 1 (best)10.77□□□□□ -0.684e-6■■□□□ 13
FUBP3Q96I24 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.822e-7■■□□□ 13
FUBP3Q96I24 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.633e-6■■□□□ 13
FUBP3Q96I24 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC14.16□□□□□ -0.142e-9■■□□□ 13
FUBP3Q96I24 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.21e-6■■□□□ 13
FUBP3Q96I24 HS3ST3B1-202ENST00000466596 2808 ntTSL 214.52□□□□□ -0.091e-6■■□□□ 13
FUBP3Q96I24 RAB14-201ENST00000373840 4145 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.276e-8■■□□□ 13
FUBP3Q96I24 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.332e-6■■□□□ 12.9
FUBP3Q96I24 SFT2D1-204ENST00000487841 2576 ntTSL 1 (best)12.88□□□□□ -0.352e-6■■□□□ 12.9
FUBP3Q96I24 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.041e-9■■□□□ 12.9
FUBP3Q96I24 YY1-205ENST00000554804 1114 ntTSL 37.42□□□□□ -1.221e-9■■□□□ 12.9
FUBP3Q96I24 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.085e-7■■□□□ 12.9
FUBP3Q96I24 C16orf72-202ENST00000574285 10359 ntTSL 24.8□□□□□ -1.645e-7■■□□□ 12.9
FUBP3Q96I24 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.513e-6■■□□□ 12.9
FUBP3Q96I24 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.32e-6■■□□□ 12.9
FUBP3Q96I24 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.258e-10■■□□□ 12.9
FUBP3Q96I24 EEA1-201ENST00000322349 9875 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.837e-9■■□□□ 12.9
FUBP3Q96I24 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.81■■□□□ 1.081e-6■■□□□ 12.9
FUBP3Q96I24 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.534e-13■■□□□ 12.9
FUBP3Q96I24 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.534e-13■■□□□ 12.9
FUBP3Q96I24 DCTD-203ENST00000500813 1829 ntTSL 217.87■□□□□ 0.451e-6■■□□□ 12.9
FUBP3Q96I24 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.221e-6■■□□□ 12.9
FUBP3Q96I24 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.251e-6■■□□□ 12.9
FUBP3Q96I24 PTPRK-204ENST00000368210 5025 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.31e-6■■□□□ 12.9
FUBP3Q96I24 CHST15-201ENST00000346248 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.455e-6■■□□□ 12.9
FUBP3Q96I24 CHST15-202ENST00000435907 4820 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.535e-6■■□□□ 12.9
FUBP3Q96I24 PTPRK-206ENST00000368215 4651 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.061e-6■■□□□ 12.9
FUBP3Q96I24 UBR3-205ENST00000439681 2183 ntTSL 27.92□□□□□ -1.141e-6■■□□□ 12.9
FUBP3Q96I24 KMT2C-201ENST00000262189 16862 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.311e-6■■□□□ 12.9
FUBP3Q96I24 KMT2C-202ENST00000355193 16858 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.311e-6■■□□□ 12.9
FUBP3Q96I24 KMT2C-212ENST00000558084 16862 ntTSL 1 (best)6.87□□□□□ -1.311e-6■■□□□ 12.9
FUBP3Q96I24 SLC1A2-205ENST00000464522 607 ntTSL 35.65□□□□□ -1.51e-6■■□□□ 12.9
FUBP3Q96I24 KMT2C-203ENST00000360104 11186 ntTSL 1 (best)5.34□□□□□ -1.551e-6■■□□□ 12.9
FUBP3Q96I24 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.5□□□□□ -1.691e-6■■□□□ 12.9
FUBP3Q96I24 CHD9-201ENST00000219084 8739 ntTSL 1 (best)4.37□□□□□ -1.711e-6■■□□□ 12.9
FUBP3Q96I24 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.881e-6■■□□□ 12.9
FUBP3Q96I24 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.75□□□□□ -1.971e-6■■□□□ 12.9
FUBP3Q96I24 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.74□□□□□ -1.971e-6■■□□□ 12.9
FUBP3Q96I24 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.971e-6■■□□□ 12.9
FUBP3Q96I24 TNFRSF21-201ENST00000296861 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.352e-6■■□□□ 12.8
FUBP3Q96I24 ROBO1-201ENST00000436010 7501 ntTSL 5 BASIC12.26□□□□□ -0.452e-10■■□□□ 12.8
FUBP3Q96I24 ROBO1-212ENST00000618833 7492 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.492e-10■■□□□ 12.8
FUBP3Q96I24 ROBO1-213ENST00000618846 7483 ntTSL 5 BASIC11.96□□□□□ -0.492e-10■■□□□ 12.8
FUBP3Q96I24 ROBO1-202ENST00000464233 6742 ntAPPRIS ALT2 TSL 5 BASIC7.44□□□□□ -1.222e-10■■□□□ 12.8
FUBP3Q96I24 AC007388.1-202ENST00000443038 522 ntTSL 422.41■■□□□ 1.182e-10■■□□□ 12.8
FUBP3Q96I24 AC007388.1-203ENST00000422128 596 ntTSL 421.87■■□□□ 1.092e-10■■□□□ 12.8
FUBP3Q96I24 SFT2D1-202ENST00000478705 659 ntTSL 217.67■□□□□ 0.422e-9■■□□□ 12.8
FUBP3Q96I24 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC15.08■□□□□ 02e-10■■□□□ 12.8
FUBP3Q96I24 AC007388.1-205ENST00000445520 499 ntTSL 214.88□□□□□ -0.032e-10■■□□□ 12.8
FUBP3Q96I24 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.052e-10■■□□□ 12.8
FUBP3Q96I24 AC007388.1-207ENST00000446698 593 ntTSL 513.48□□□□□ -0.252e-10■■□□□ 12.8
FUBP3Q96I24 AC007388.1-201ENST00000426083 1438 ntTSL 1 (best) BASIC8.12□□□□□ -1.112e-10■■□□□ 12.8
FUBP3Q96I24 SFT2D1-205ENST00000488773 546 ntTSL 55.95□□□□□ -1.462e-9■■□□□ 12.8
FUBP3Q96I24 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.543e-7■■□□□ 12.8
FUBP3Q96I24 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.543e-7■■□□□ 12.8
FUBP3Q96I24 TXNDC9-204ENST00000422767 768 ntTSL 54.99□□□□□ -1.612e-10■■□□□ 12.8
FUBP3Q96I24 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC24.49■■□□□ 1.517e-7■■□□□ 12.8
FUBP3Q96I24 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.167e-7■■□□□ 12.8
FUBP3Q96I24 TMEM165-205ENST00000508404 1657 ntTSL 222.26■■□□□ 1.157e-7■■□□□ 12.8
FUBP3Q96I24 TMEM165-203ENST00000506103 572 ntTSL 312.45□□□□□ -0.427e-7■■□□□ 12.8
FUBP3Q96I24 TMEM165-212ENST00000608091 1567 ntTSL 311.72□□□□□ -0.537e-7■■□□□ 12.8
FUBP3Q96I24 TMEM165-211ENST00000515591 1786 ntTSL 26.99□□□□□ -1.297e-7■■□□□ 12.8
FUBP3Q96I24 ANP32E-210ENST00000629042 3054 ntTSL 5 BASIC11.83□□□□□ -0.521e-6■■□□□ 12.8
FUBP3Q96I24 ANP32E-208ENST00000583931 3451 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.861e-6■■□□□ 12.8
FUBP3Q96I24 APLP2-207ENST00000525604 1590 ntTSL 217.08■□□□□ 0.329e-13■■□□□ 12.8
FUBP3Q96I24 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.259e-13■■□□□ 12.8
FUBP3Q96I24 PEG10-208ENST00000615790 6394 ntTSL 1 (best) BASIC9.4□□□□□ -0.94e-25■■□□□ 12.8
FUBP3Q96I24 PEG10-206ENST00000612941 6392 ntAPPRIS ALT2 TSL 5 BASIC8.86□□□□□ -0.994e-25■■□□□ 12.8
FUBP3Q96I24 PEG10-209ENST00000617526 6392 ntAPPRIS ALT2 TSL 5 BASIC8.86□□□□□ -0.994e-25■■□□□ 12.8
FUBP3Q96I24 PEG10-202ENST00000482108 6618 ntTSL 1 (best) BASIC8.31□□□□□ -1.084e-25■■□□□ 12.8
FUBP3Q96I24 CASC4-202ENST00000345795 3764 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.296e-7■■□□□ 12.8
FUBP3Q96I24 CASC4-201ENST00000299957 3962 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.346e-7■■□□□ 12.8
FUBP3Q96I24 PRRC2C-204ENST00000426496 10175 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.73e-6■■□□□ 12.8
FUBP3Q96I24 PRRC2C-201ENST00000338920 10355 ntAPPRIS P2 TSL 5 BASIC7.61□□□□□ -1.193e-6■■□□□ 12.8
FUBP3Q96I24 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.393e-6■■□□□ 12.8
FUBP3Q96I24 PRRC2C-211ENST00000495585 5566 ntTSL 1 (best)4.97□□□□□ -1.613e-6■■□□□ 12.8
FUBP3Q96I24 TBL1XR1-215ENST00000474363 6229 ntTSL 1 (best)7.02□□□□□ -1.295e-10■■□□□ 12.7
FUBP3Q96I24 TBL1XR1-233ENST00000637659 3105 ntTSL 53.99□□□□□ -1.775e-10■■□□□ 12.7
FUBP3Q96I24 TBL1XR1-228ENST00000636864 6888 ntTSL 52.13□□□□□ -2.075e-10■■□□□ 12.7
FUBP3Q96I24 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.095e-10■■□□□ 12.7
FUBP3Q96I24 PUM1-202ENST00000373741 4242 ntTSL 1 (best) BASIC11.75□□□□□ -0.535e-15■■□□□ 12.7
FUBP3Q96I24 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC6.9□□□□□ -1.315e-15■■□□□ 12.7
FUBP3Q96I24 PUM1-211ENST00000498419 3068 ntTSL 56.79□□□□□ -1.325e-15■■□□□ 12.7
FUBP3Q96I24 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC6.45□□□□□ -1.385e-15■■□□□ 12.7
FUBP3Q96I24 LMAN1-205ENST00000592562 576 ntTSL 25.33□□□□□ -1.565e-15■■□□□ 12.7
FUBP3Q96I24 HK2-201ENST00000290573 5772 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.251e-16■■□□□ 12.7
FUBP3Q96I24 HK2-202ENST00000409174 5278 ntTSL 1 (best) BASIC11.13□□□□□ -0.631e-16■■□□□ 12.7
FUBP3Q96I24 PEG10-204ENST00000493935 763 ntTSL 413.17□□□□□ -0.34e-25■■□□□ 12.7
FUBP3Q96I24 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.856e-9■■□□□ 12.7
FUBP3Q96I24 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.316e-9■■□□□ 12.7
Retrieved 100 of 4,568 protein–RNA pairs in 266.1 ms