RNA–Protein interactions for RNA: ENST00000398246.7

LONRF1-201, Transcript of LON peptidase N-terminal domain and ring finger 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LONRF1, Length 3,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF1-201ENST00000398246 NISCHQ9Y2I1 1504 aa29.71■■■□□ 2.35
LONRF1-201ENST00000398246 SHROOM4Q9ULL8 1493 aa27.91■■■□□ 2.06
LONRF1-201ENST00000398246 SUPT5HO00267 1087 aaKnown RBP27.79■■■□□ 2.04
LONRF1-201ENST00000398246 DCAF8L2P0C7V8 631 aa27.64■■■□□ 2.02
LONRF1-201ENST00000398246 PCGF6Q9BYE7 350 aa26.79■■□□□ 1.88
LONRF1-201ENST00000398246 EHMT2Q96KQ7 1210 aa26.74■■□□□ 1.87
LONRF1-201ENST00000398246 PPARGC1BQ86YN6 1023 aaKnown RBP26.7■■□□□ 1.87
LONRF1-201ENST00000398246 HRCP23327 699 aa26.53■■□□□ 1.84
LONRF1-201ENST00000398246 LOC105371045A0A1W2PR82 267 aa26.11■■□□□ 1.77
LONRF1-201ENST00000398246 CHIC1Q5VXU3 224 aa26.1■■□□□ 1.77
LONRF1-201ENST00000398246 FAM9AQ8IZU1 332 aaPredicted RBP26.08■■□□□ 1.77
LONRF1-201ENST00000398246 MYO15BQ96JP2 1530 aa25.96■■□□□ 1.75
LONRF1-201ENST00000398246 TTBK1Q5TCY1 1321 aaPredicted RBP25.79■■□□□ 1.72
LONRF1-201ENST00000398246 CCDC180Q9P1Z9 1646 aa25.44■■□□□ 1.66
LONRF1-201ENST00000398246 TRIM26Q12899 539 aaPredicted RBP25.36■■□□□ 1.65
LONRF1-201ENST00000398246 TRIM41Q8WV44 630 aa25.23■■□□□ 1.63
LONRF1-201ENST00000398246 SCAF1Q9H7N4 1312 aaKnown RBP25.19■■□□□ 1.62
LONRF1-201ENST00000398246 ZCCHC6Q5VYS8 1495 aaKnown RBP25.08■■□□□ 1.6
LONRF1-201ENST00000398246 PELP1Q8IZL8 1130 aaKnown RBP24.96■■□□□ 1.59
LONRF1-201ENST00000398246 RANGAP1P46060 587 aaPredicted RBP24.93■■□□□ 1.58
LONRF1-201ENST00000398246 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.92■■□□□ 1.58
LONRF1-201ENST00000398246 CCER1Q8TC90 406 aaPredicted RBP24.89■■□□□ 1.58
LONRF1-201ENST00000398246 ZEB1P37275 1124 aaPredicted RBP24.88■■□□□ 1.57
LONRF1-201ENST00000398246 DCAF1Q9Y4B6 1507 aa24.84■■□□□ 1.57
LONRF1-201ENST00000398246 YTHDC1Q96MU7 727 aaKnown RBP24.83■■□□□ 1.56
LONRF1-201ENST00000398246 ABCC9O60706 1549 aa24.71■■□□□ 1.55
LONRF1-201ENST00000398246 NEUROD1Q13562 356 aa24.71■■□□□ 1.55
LONRF1-201ENST00000398246 GTF3C3Q9Y5Q9 886 aa24.68■■□□□ 1.54
LONRF1-201ENST00000398246 ACIN1Q9UKV3 1341 aaKnown RBP24.54■■□□□ 1.52
LONRF1-201ENST00000398246 DIEXFQ68CQ4 756 aaKnown RBP24.48■■□□□ 1.51
LONRF1-201ENST00000398246 CENPBP07199 599 aaPredicted RBP24.44■■□□□ 1.5
LONRF1-201ENST00000398246 UBTFP17480 764 aaKnown RBP24.41■■□□□ 1.5
LONRF1-201ENST00000398246 HNRNPUL2Q1KMD3 747 aaKnown RBP24.32■■□□□ 1.48
LONRF1-201ENST00000398246 PABPN1Q86U42 306 aaKnown RBP eCLIP24.2■■□□□ 1.46
LONRF1-201ENST00000398246 SCRIBQ14160 1630 aa24.2■■□□□ 1.46
LONRF1-201ENST00000398246 APLP2Q06481 763 aa23.97■■□□□ 1.43
LONRF1-201ENST00000398246 ITGAEP38570 1179 aa23.97■■□□□ 1.43
LONRF1-201ENST00000398246 RSF1Q96T23 1441 aaPredicted RBP23.91■■□□□ 1.42
LONRF1-201ENST00000398246 MIER1Q8N108 512 aa23.9■■□□□ 1.42
LONRF1-201ENST00000398246 ZNF316A6NFI3 1004 aaPredicted RBP23.86■■□□□ 1.41
LONRF1-201ENST00000398246 RB1CC1Q8TDY2 1594 aa23.76■■□□□ 1.39
LONRF1-201ENST00000398246 MYT1Q01538 1121 aa23.74■■□□□ 1.39
LONRF1-201ENST00000398246 ATP1B4Q9UN42 357 aaPredicted RBP23.72■■□□□ 1.39
LONRF1-201ENST00000398246 CECR2Q9BXF3 1484 aa23.67■■□□□ 1.38
LONRF1-201ENST00000398246 BCANQ96GW7 911 aa23.62■■□□□ 1.37
LONRF1-201ENST00000398246 NACADO15069 1562 aa23.57■■□□□ 1.36
LONRF1-201ENST00000398246 CSRNP3Q8WYN3 585 aa23.47■■□□□ 1.35
LONRF1-201ENST00000398246 CNGB1Q14028 1251 aaPredicted RBP23.4■■□□□ 1.34
LONRF1-201ENST00000398246 CEP162Q5TB80 1403 aa23.36■■□□□ 1.33
LONRF1-201ENST00000398246 MROH2BQ7Z745 1585 aa23.32■■□□□ 1.32
LONRF1-201ENST00000398246 HIRIP3Q9BW71 556 aaPredicted RBP23.32■■□□□ 1.32
LONRF1-201ENST00000398246 SOGA1O94964 1423 aa23.3■■□□□ 1.32
LONRF1-201ENST00000398246 SUPT16HQ9Y5B9 1047 aaKnown RBP23.26■■□□□ 1.31
LONRF1-201ENST00000398246 ABCC8Q09428 1581 aa23.23■■□□□ 1.31
LONRF1-201ENST00000398246 CCDC88BA6NC98 1476 aa23.23■■□□□ 1.31
LONRF1-201ENST00000398246 KCNH8Q96L42 1107 aa23.19■■□□□ 1.3
LONRF1-201ENST00000398246 P3H3Q8IVL6 736 aa23.17■■□□□ 1.3
LONRF1-201ENST00000398246 RUSC2Q8N2Y8 1516 aa23.14■■□□□ 1.29
LONRF1-201ENST00000398246 WIZO95785 1651 aa23.09■■□□□ 1.29
LONRF1-201ENST00000398246 FAM50AQ14320 339 aaKnown RBP23.09■■□□□ 1.29
LONRF1-201ENST00000398246 FKBP8Q14318 412 aa23.07■■□□□ 1.28
LONRF1-201ENST00000398246 TSHZ2Q9NRE2 1034 aa23.07■■□□□ 1.28
LONRF1-201ENST00000398246 UNC13AQ9UPW8 1703 aa23.02■■□□□ 1.27
LONRF1-201ENST00000398246 DDX10Q13206 875 aaKnown RBP23.01■■□□□ 1.27
LONRF1-201ENST00000398246 TRIM52Q96A61 297 aa22.99■■□□□ 1.27
LONRF1-201ENST00000398246 TNIKQ9UKE5 1360 aa22.98■■□□□ 1.27
LONRF1-201ENST00000398246 ANP32EQ9BTT0 268 aa22.96■■□□□ 1.27
LONRF1-201ENST00000398246 SENP3-EIF4A1A0A087X0R7 540 aa22.94■■□□□ 1.26
LONRF1-201ENST00000398246 BCL11AQ9H165 835 aa22.93■■□□□ 1.26
LONRF1-201ENST00000398246 IRX6P78412 446 aaPredicted RBP22.9■■□□□ 1.26
LONRF1-201ENST00000398246 NEFLP07196 543 aa22.9■■□□□ 1.26
LONRF1-201ENST00000398246 POLR3GLQ9BT43 218 aa22.88■■□□□ 1.25
LONRF1-201ENST00000398246 ARID3CA6NKF2 412 aa22.87■■□□□ 1.25
LONRF1-201ENST00000398246 CLIP1P30622 1438 aa22.86■■□□□ 1.25
LONRF1-201ENST00000398246 KANK4Q5T7N3 995 aaPredicted RBP22.86■■□□□ 1.25
LONRF1-201ENST00000398246 WRNQ14191 1432 aaPredicted RBP eCLIP22.85■■□□□ 1.25
LONRF1-201ENST00000398246 BAZ1AQ9NRL2 1556 aaPredicted RBP22.84■■□□□ 1.25
LONRF1-201ENST00000398246 SIN3AQ96ST3 1273 aa22.8■■□□□ 1.24
LONRF1-201ENST00000398246 ERICH6Q7L0X2 663 aa22.76■■□□□ 1.23
LONRF1-201ENST00000398246 BICRAQ9NZM4 1560 aa22.75■■□□□ 1.23
LONRF1-201ENST00000398246 GOLGA3Q08378 1498 aa22.74■■□□□ 1.23
LONRF1-201ENST00000398246 SMARCA4P51532 1647 aa22.7■■□□□ 1.22
LONRF1-201ENST00000398246 RBM19Q9Y4C8 960 aaKnown RBP22.66■■□□□ 1.22
LONRF1-201ENST00000398246 DHX57Q6P158 1386 aaKnown RBP22.62■■□□□ 1.21
LONRF1-201ENST00000398246 EIF4G1Q04637 1599 aaKnown RBP22.56■■□□□ 1.2
LONRF1-201ENST00000398246 TOP2AP11388 1531 aaKnown RBP22.55■■□□□ 1.2
LONRF1-201ENST00000398246 BAZ1BQ9UIG0 1483 aaKnown RBP22.55■■□□□ 1.2
LONRF1-201ENST00000398246 VPS8Q8N3P4 1428 aa22.53■■□□□ 1.2
LONRF1-201ENST00000398246 ANP32CO43423 234 aa22.53■■□□□ 1.2
LONRF1-201ENST00000398246 RAPGEF2Q9Y4G8 1499 aa22.52■■□□□ 1.2
LONRF1-201ENST00000398246 CHIC2Q9UKJ5 165 aa22.51■■□□□ 1.19
LONRF1-201ENST00000398246 CLSPNQ9HAW4 1339 aa22.5■■□□□ 1.19
LONRF1-201ENST00000398246 HNRNPUQ00839 825 aaKnown RBP eCLIP22.48■■□□□ 1.19
LONRF1-201ENST00000398246 ZNF326Q5BKZ1 582 aaKnown RBP22.48■■□□□ 1.19
LONRF1-201ENST00000398246 CEP164Q9UPV0 1460 aa22.46■■□□□ 1.19
LONRF1-201ENST00000398246 EEA1Q15075 1411 aa22.46■■□□□ 1.19
LONRF1-201ENST00000398246 SMARCA2P51531 1590 aa22.45■■□□□ 1.18
LONRF1-201ENST00000398246 FAM9BQ8IZU0 186 aa22.41■■□□□ 1.18
LONRF1-201ENST00000398246 NBR1Q14596 966 aa22.38■■□□□ 1.17
LONRF1-201ENST00000398246 CDK11AQ9UQ88 783 aaPredicted RBP22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms