Protein–RNA interactions for Protein: Q96BP2

CHCHD1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD1Q96BP2 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CHCHD1Q96BP2 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC16.14■□□□□ 0.17
CHCHD1Q96BP2 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CHCHD1Q96BP2 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC16.14■□□□□ 0.17
CHCHD1Q96BP2 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CHCHD1Q96BP2 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
CHCHD1Q96BP2 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
CHCHD1Q96BP2 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CHCHD1Q96BP2 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CHCHD1Q96BP2 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CHCHD1Q96BP2 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CHCHD1Q96BP2 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC16.13■□□□□ 0.17
CHCHD1Q96BP2 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CHCHD1Q96BP2 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CHCHD1Q96BP2 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC16.13■□□□□ 0.17
CHCHD1Q96BP2 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC16.13■□□□□ 0.17
CHCHD1Q96BP2 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CHCHD1Q96BP2 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CHCHD1Q96BP2 SUZ12P1-203ENST00000578195 985 ntBASIC16.13■□□□□ 0.17
CHCHD1Q96BP2 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC16.13■□□□□ 0.17
CHCHD1Q96BP2 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CHCHD1Q96BP2 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CHCHD1Q96BP2 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CHCHD1Q96BP2 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC16.13■□□□□ 0.17
CHCHD1Q96BP2 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC16.12■□□□□ 0.17
CHCHD1Q96BP2 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC16.12■□□□□ 0.17
CHCHD1Q96BP2 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
CHCHD1Q96BP2 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC16.12■□□□□ 0.17
CHCHD1Q96BP2 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC16.12■□□□□ 0.17
CHCHD1Q96BP2 DUX4L28-201ENST00000623687 678 ntBASIC16.12■□□□□ 0.17
CHCHD1Q96BP2 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CHCHD1Q96BP2 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CHCHD1Q96BP2 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC16.12■□□□□ 0.17
CHCHD1Q96BP2 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CHCHD1Q96BP2 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CHCHD1Q96BP2 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CHCHD1Q96BP2 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CHCHD1Q96BP2 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC16.12■□□□□ 0.17
CHCHD1Q96BP2 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
CHCHD1Q96BP2 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
CHCHD1Q96BP2 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
CHCHD1Q96BP2 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CHCHD1Q96BP2 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHCHD1Q96BP2 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHCHD1Q96BP2 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHCHD1Q96BP2 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
CHCHD1Q96BP2 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHCHD1Q96BP2 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC16.11■□□□□ 0.17
CHCHD1Q96BP2 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC16.11■□□□□ 0.17
CHCHD1Q96BP2 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC16.11■□□□□ 0.17
CHCHD1Q96BP2 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
CHCHD1Q96BP2 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
CHCHD1Q96BP2 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHCHD1Q96BP2 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CHCHD1Q96BP2 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
CHCHD1Q96BP2 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHCHD1Q96BP2 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
CHCHD1Q96BP2 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHCHD1Q96BP2 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC16.11■□□□□ 0.17
CHCHD1Q96BP2 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHCHD1Q96BP2 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHCHD1Q96BP2 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC16.1■□□□□ 0.17
CHCHD1Q96BP2 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC16.1■□□□□ 0.17
CHCHD1Q96BP2 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHCHD1Q96BP2 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CHCHD1Q96BP2 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHCHD1Q96BP2 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHCHD1Q96BP2 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CHCHD1Q96BP2 AC126177.7-201ENST00000547904 679 ntBASIC16.1■□□□□ 0.17
CHCHD1Q96BP2 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CHCHD1Q96BP2 AL157384.1-201ENST00000445995 2473 ntBASIC16.1■□□□□ 0.17
CHCHD1Q96BP2 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC16.1■□□□□ 0.17
CHCHD1Q96BP2 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC16.1■□□□□ 0.17
CHCHD1Q96BP2 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
CHCHD1Q96BP2 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
CHCHD1Q96BP2 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHCHD1Q96BP2 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC16.09■□□□□ 0.17
CHCHD1Q96BP2 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
CHCHD1Q96BP2 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHCHD1Q96BP2 CHST11-203ENST00000547956 936 ntTSL 2 BASIC16.09■□□□□ 0.17
CHCHD1Q96BP2 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CHCHD1Q96BP2 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHCHD1Q96BP2 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CHCHD1Q96BP2 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHCHD1Q96BP2 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC16.09■□□□□ 0.17
CHCHD1Q96BP2 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC16.09■□□□□ 0.17
CHCHD1Q96BP2 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHCHD1Q96BP2 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC16.09■□□□□ 0.17
CHCHD1Q96BP2 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
CHCHD1Q96BP2 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
CHCHD1Q96BP2 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CHCHD1Q96BP2 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CHCHD1Q96BP2 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.17
CHCHD1Q96BP2 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
CHCHD1Q96BP2 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CHCHD1Q96BP2 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CHCHD1Q96BP2 AC244015.2-201ENST00000616358 1861 ntBASIC16.08■□□□□ 0.17
CHCHD1Q96BP2 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CHCHD1Q96BP2 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC16.08■□□□□ 0.16
CHCHD1Q96BP2 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms