Protein–RNA interactions for Protein: Q8TDI0

CHD5, Chromodomain-helicase-DNA-binding protein 5, humanhuman

Predictions only

Length 1,954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5Q8TDI0 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC22.59■■□□□ 1.21
CHD5Q8TDI0 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CHD5Q8TDI0 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC22.59■■□□□ 1.21
CHD5Q8TDI0 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CHD5Q8TDI0 BX842568.3-201ENST00000418104 571 ntBASIC22.59■■□□□ 1.21
CHD5Q8TDI0 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC22.59■■□□□ 1.21
CHD5Q8TDI0 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CHD5Q8TDI0 GCA-201ENST00000233612 1694 ntTSL 2 BASIC22.58■■□□□ 1.21
CHD5Q8TDI0 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC22.58■■□□□ 1.21
CHD5Q8TDI0 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC22.58■■□□□ 1.21
CHD5Q8TDI0 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC22.58■■□□□ 1.21
CHD5Q8TDI0 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
CHD5Q8TDI0 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.21
CHD5Q8TDI0 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC22.58■■□□□ 1.21
CHD5Q8TDI0 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC22.58■■□□□ 1.21
CHD5Q8TDI0 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC22.58■■□□□ 1.21
CHD5Q8TDI0 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
CHD5Q8TDI0 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC22.58■■□□□ 1.2
CHD5Q8TDI0 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC22.58■■□□□ 1.2
CHD5Q8TDI0 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
CHD5Q8TDI0 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
CHD5Q8TDI0 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC22.57■■□□□ 1.2
CHD5Q8TDI0 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CHD5Q8TDI0 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
CHD5Q8TDI0 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC22.57■■□□□ 1.2
CHD5Q8TDI0 MAG-206ENST00000597035 542 ntTSL 4 BASIC22.57■■□□□ 1.2
CHD5Q8TDI0 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CHD5Q8TDI0 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC22.56■■□□□ 1.2
CHD5Q8TDI0 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC22.56■■□□□ 1.2
CHD5Q8TDI0 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CHD5Q8TDI0 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CHD5Q8TDI0 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CHD5Q8TDI0 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC22.56■■□□□ 1.2
CHD5Q8TDI0 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC22.56■■□□□ 1.2
CHD5Q8TDI0 RASA4CP-201ENST00000424092 1398 ntBASIC22.56■■□□□ 1.2
CHD5Q8TDI0 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC22.56■■□□□ 1.2
CHD5Q8TDI0 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CHD5Q8TDI0 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
CHD5Q8TDI0 LINC01960-201ENST00000563759 1884 ntBASIC22.55■■□□□ 1.2
CHD5Q8TDI0 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
CHD5Q8TDI0 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
CHD5Q8TDI0 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC22.55■■□□□ 1.2
CHD5Q8TDI0 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CHD5Q8TDI0 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CHD5Q8TDI0 AC099791.1-201ENST00000416440 715 ntBASIC22.54■■□□□ 1.2
CHD5Q8TDI0 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC22.54■■□□□ 1.2
CHD5Q8TDI0 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CHD5Q8TDI0 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
CHD5Q8TDI0 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
CHD5Q8TDI0 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
CHD5Q8TDI0 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CHD5Q8TDI0 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC22.54■■□□□ 1.2
CHD5Q8TDI0 AC027682.1-201ENST00000562846 899 ntBASIC22.54■■□□□ 1.2
CHD5Q8TDI0 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
CHD5Q8TDI0 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CHD5Q8TDI0 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
CHD5Q8TDI0 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
CHD5Q8TDI0 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
CHD5Q8TDI0 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CHD5Q8TDI0 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CHD5Q8TDI0 AL136967.2-201ENST00000623968 743 ntBASIC22.53■■□□□ 1.2
CHD5Q8TDI0 AL031602.1-201ENST00000633169 911 ntBASIC22.53■■□□□ 1.2
CHD5Q8TDI0 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC22.53■■□□□ 1.2
CHD5Q8TDI0 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CHD5Q8TDI0 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC22.53■■□□□ 1.2
CHD5Q8TDI0 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CHD5Q8TDI0 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
CHD5Q8TDI0 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
CHD5Q8TDI0 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
CHD5Q8TDI0 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
CHD5Q8TDI0 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC22.52■■□□□ 1.2
CHD5Q8TDI0 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC22.52■■□□□ 1.2
CHD5Q8TDI0 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC22.52■■□□□ 1.2
CHD5Q8TDI0 AC233992.3-201ENST00000607491 485 ntBASIC22.52■■□□□ 1.2
CHD5Q8TDI0 AL355001.2-201ENST00000620617 1191 ntBASIC22.52■■□□□ 1.2
CHD5Q8TDI0 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
CHD5Q8TDI0 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
CHD5Q8TDI0 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CHD5Q8TDI0 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
CHD5Q8TDI0 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC22.51■■□□□ 1.19
CHD5Q8TDI0 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CHD5Q8TDI0 CASK-201ENST00000378154 2494 ntTSL 5 BASIC22.51■■□□□ 1.19
CHD5Q8TDI0 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC22.51■■□□□ 1.19
CHD5Q8TDI0 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
CHD5Q8TDI0 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CHD5Q8TDI0 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
CHD5Q8TDI0 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
CHD5Q8TDI0 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
CHD5Q8TDI0 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CHD5Q8TDI0 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
CHD5Q8TDI0 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
CHD5Q8TDI0 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC22.5■■□□□ 1.19
CHD5Q8TDI0 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CHD5Q8TDI0 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC22.5■■□□□ 1.19
CHD5Q8TDI0 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC22.5■■□□□ 1.19
CHD5Q8TDI0 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
CHD5Q8TDI0 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC22.5■■□□□ 1.19
CHD5Q8TDI0 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC22.5■■□□□ 1.19
CHD5Q8TDI0 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC22.5■■□□□ 1.19
CHD5Q8TDI0 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms