Protein–RNA interactions for Protein: Q8NAE3

LINC01555, Putative uncharacterized protein encoded by LINC01555, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01555Q8NAE3 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC21.42■■□□□ 1.02
LINC01555Q8NAE3 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
LINC01555Q8NAE3 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
LINC01555Q8NAE3 EDA-201ENST00000338901 1233 ntBASIC21.41■■□□□ 1.02
LINC01555Q8NAE3 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC21.41■■□□□ 1.02
LINC01555Q8NAE3 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
LINC01555Q8NAE3 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
LINC01555Q8NAE3 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
LINC01555Q8NAE3 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
LINC01555Q8NAE3 AC005837.3-201ENST00000612163 286 ntBASIC21.4■■□□□ 1.02
LINC01555Q8NAE3 GRAMD4P4-201ENST00000613563 1115 ntBASIC21.4■■□□□ 1.02
LINC01555Q8NAE3 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC21.4■■□□□ 1.02
LINC01555Q8NAE3 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC21.4■■□□□ 1.02
LINC01555Q8NAE3 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
LINC01555Q8NAE3 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC21.39■■□□□ 1.02
LINC01555Q8NAE3 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
LINC01555Q8NAE3 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.02
LINC01555Q8NAE3 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
LINC01555Q8NAE3 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC21.39■■□□□ 1.01
LINC01555Q8NAE3 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC21.39■■□□□ 1.01
LINC01555Q8NAE3 SNX3-202ENST00000349379 890 ntTSL 2 BASIC21.39■■□□□ 1.01
LINC01555Q8NAE3 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC21.39■■□□□ 1.01
LINC01555Q8NAE3 AL355001.2-201ENST00000620617 1191 ntBASIC21.39■■□□□ 1.01
LINC01555Q8NAE3 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
LINC01555Q8NAE3 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
LINC01555Q8NAE3 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC21.38■■□□□ 1.01
LINC01555Q8NAE3 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
LINC01555Q8NAE3 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
LINC01555Q8NAE3 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
LINC01555Q8NAE3 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
LINC01555Q8NAE3 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
LINC01555Q8NAE3 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
LINC01555Q8NAE3 SUDS3P1-201ENST00000505831 966 ntBASIC21.38■■□□□ 1.01
LINC01555Q8NAE3 AP001330.3-201ENST00000520123 633 ntBASIC21.38■■□□□ 1.01
LINC01555Q8NAE3 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC21.38■■□□□ 1.01
LINC01555Q8NAE3 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC21.38■■□□□ 1.01
LINC01555Q8NAE3 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
LINC01555Q8NAE3 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
LINC01555Q8NAE3 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
LINC01555Q8NAE3 C9orf163-202ENST00000624034 2573 ntBASIC21.38■■□□□ 1.01
LINC01555Q8NAE3 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC21.37■■□□□ 1.01
LINC01555Q8NAE3 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC21.37■■□□□ 1.01
LINC01555Q8NAE3 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
LINC01555Q8NAE3 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC21.37■■□□□ 1.01
LINC01555Q8NAE3 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
LINC01555Q8NAE3 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
LINC01555Q8NAE3 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
LINC01555Q8NAE3 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC21.37■■□□□ 1.01
LINC01555Q8NAE3 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
LINC01555Q8NAE3 SLC47A1P1-202ENST00000449666 945 ntBASIC21.37■■□□□ 1.01
LINC01555Q8NAE3 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
LINC01555Q8NAE3 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC21.37■■□□□ 1.01
LINC01555Q8NAE3 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
LINC01555Q8NAE3 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC21.37■■□□□ 1.01
LINC01555Q8NAE3 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC21.37■■□□□ 1.01
LINC01555Q8NAE3 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC21.37■■□□□ 1.01
LINC01555Q8NAE3 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
LINC01555Q8NAE3 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
LINC01555Q8NAE3 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC21.36■■□□□ 1.01
LINC01555Q8NAE3 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
LINC01555Q8NAE3 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
LINC01555Q8NAE3 MIR939-201ENST00000401314 82 ntBASIC21.36■■□□□ 1.01
LINC01555Q8NAE3 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
LINC01555Q8NAE3 OR2I1P-207ENST00000453522 948 ntBASIC21.36■■□□□ 1.01
LINC01555Q8NAE3 AF213884.3-201ENST00000563833 479 ntBASIC21.36■■□□□ 1.01
LINC01555Q8NAE3 AC010525.1-201ENST00000585559 441 ntBASIC21.36■■□□□ 1.01
LINC01555Q8NAE3 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
LINC01555Q8NAE3 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
LINC01555Q8NAE3 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
LINC01555Q8NAE3 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
LINC01555Q8NAE3 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
LINC01555Q8NAE3 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC21.35■■□□□ 1.01
LINC01555Q8NAE3 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
LINC01555Q8NAE3 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
LINC01555Q8NAE3 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
LINC01555Q8NAE3 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC21.35■■□□□ 1.01
LINC01555Q8NAE3 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC21.35■■□□□ 1.01
LINC01555Q8NAE3 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC21.35■■□□□ 1.01
LINC01555Q8NAE3 AL136967.2-201ENST00000623968 743 ntBASIC21.35■■□□□ 1.01
LINC01555Q8NAE3 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
LINC01555Q8NAE3 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
LINC01555Q8NAE3 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC21.35■■□□□ 1.01
LINC01555Q8NAE3 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
LINC01555Q8NAE3 ME2-208ENST00000638937 2471 ntTSL 5 BASIC21.35■■□□□ 1.01
LINC01555Q8NAE3 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC21.35■■□□□ 1.01
LINC01555Q8NAE3 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
LINC01555Q8NAE3 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC21.35■■□□□ 1.01
LINC01555Q8NAE3 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
LINC01555Q8NAE3 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
LINC01555Q8NAE3 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
LINC01555Q8NAE3 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
LINC01555Q8NAE3 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC21.34■■□□□ 1.01
LINC01555Q8NAE3 STX4-202ENST00000394998 1498 ntTSL 2 BASIC21.34■■□□□ 1.01
LINC01555Q8NAE3 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC21.34■■□□□ 1.01
LINC01555Q8NAE3 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
LINC01555Q8NAE3 BX842568.3-201ENST00000418104 571 ntBASIC21.34■■□□□ 1.01
LINC01555Q8NAE3 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
LINC01555Q8NAE3 MAG-206ENST00000597035 542 ntTSL 4 BASIC21.34■■□□□ 1.01
LINC01555Q8NAE3 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC21.34■■□□□ 1.01
LINC01555Q8NAE3 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms