Protein–RNA interactions for Protein: Q86YV9

HPS6, Hermansky-Pudlak syndrome 6 protein, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS6Q86YV9 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
HPS6Q86YV9 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC21.74■■□□□ 1.07
HPS6Q86YV9 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
HPS6Q86YV9 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
HPS6Q86YV9 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC21.74■■□□□ 1.07
HPS6Q86YV9 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC21.74■■□□□ 1.07
HPS6Q86YV9 AC133561.4-201ENST00000566112 224 ntBASIC21.74■■□□□ 1.07
HPS6Q86YV9 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
HPS6Q86YV9 H19-210ENST00000439725 1929 ntTSL 2 BASIC21.74■■□□□ 1.07
HPS6Q86YV9 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
HPS6Q86YV9 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
HPS6Q86YV9 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC21.73■■□□□ 1.07
HPS6Q86YV9 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
HPS6Q86YV9 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC21.73■■□□□ 1.07
HPS6Q86YV9 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
HPS6Q86YV9 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
HPS6Q86YV9 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC21.73■■□□□ 1.07
HPS6Q86YV9 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
HPS6Q86YV9 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
HPS6Q86YV9 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
HPS6Q86YV9 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC21.72■■□□□ 1.07
HPS6Q86YV9 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
HPS6Q86YV9 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC21.72■■□□□ 1.07
HPS6Q86YV9 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
HPS6Q86YV9 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
HPS6Q86YV9 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
HPS6Q86YV9 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
HPS6Q86YV9 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC21.72■■□□□ 1.07
HPS6Q86YV9 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
HPS6Q86YV9 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC21.72■■□□□ 1.07
HPS6Q86YV9 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
HPS6Q86YV9 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
HPS6Q86YV9 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
HPS6Q86YV9 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
HPS6Q86YV9 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
HPS6Q86YV9 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
HPS6Q86YV9 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC21.71■■□□□ 1.07
HPS6Q86YV9 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
HPS6Q86YV9 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC21.71■■□□□ 1.07
HPS6Q86YV9 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
HPS6Q86YV9 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC21.71■■□□□ 1.07
HPS6Q86YV9 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
HPS6Q86YV9 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
HPS6Q86YV9 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
HPS6Q86YV9 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
HPS6Q86YV9 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
HPS6Q86YV9 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
HPS6Q86YV9 LSM4-201ENST00000252816 986 ntTSL 2 BASIC21.7■■□□□ 1.06
HPS6Q86YV9 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
HPS6Q86YV9 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
HPS6Q86YV9 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
HPS6Q86YV9 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC21.7■■□□□ 1.06
HPS6Q86YV9 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC21.7■■□□□ 1.06
HPS6Q86YV9 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
HPS6Q86YV9 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
HPS6Q86YV9 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
HPS6Q86YV9 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
HPS6Q86YV9 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC21.69■■□□□ 1.06
HPS6Q86YV9 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
HPS6Q86YV9 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
HPS6Q86YV9 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
HPS6Q86YV9 SENP5-202ENST00000419026 973 ntTSL 3 BASIC21.69■■□□□ 1.06
HPS6Q86YV9 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
HPS6Q86YV9 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
HPS6Q86YV9 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
HPS6Q86YV9 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
HPS6Q86YV9 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
HPS6Q86YV9 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.68■■□□□ 1.06
HPS6Q86YV9 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
HPS6Q86YV9 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC21.68■■□□□ 1.06
HPS6Q86YV9 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
HPS6Q86YV9 AC242852.2-201ENST00000615738 1807 ntBASIC21.68■■□□□ 1.06
HPS6Q86YV9 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
HPS6Q86YV9 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
HPS6Q86YV9 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
HPS6Q86YV9 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
HPS6Q86YV9 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
HPS6Q86YV9 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
HPS6Q86YV9 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.67■■□□□ 1.06
HPS6Q86YV9 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
HPS6Q86YV9 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.67■■□□□ 1.06
HPS6Q86YV9 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC21.67■■□□□ 1.06
HPS6Q86YV9 AK3-203ENST00000447596 705 ntTSL 2 BASIC21.67■■□□□ 1.06
HPS6Q86YV9 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC21.67■■□□□ 1.06
HPS6Q86YV9 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
HPS6Q86YV9 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
HPS6Q86YV9 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC21.67■■□□□ 1.06
HPS6Q86YV9 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
HPS6Q86YV9 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
HPS6Q86YV9 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
HPS6Q86YV9 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
HPS6Q86YV9 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC21.66■■□□□ 1.06
HPS6Q86YV9 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
HPS6Q86YV9 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC21.66■■□□□ 1.06
HPS6Q86YV9 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC21.66■■□□□ 1.06
HPS6Q86YV9 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC21.66■■□□□ 1.06
HPS6Q86YV9 AC110285.6-201ENST00000617652 491 ntBASIC21.66■■□□□ 1.06
HPS6Q86YV9 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
HPS6Q86YV9 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC21.66■■□□□ 1.06
HPS6Q86YV9 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC21.66■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms