Protein–RNA interactions for Protein: P09603

CSF1, Macrophage colony-stimulating factor 1, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1P09603 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC19.08■□□□□ 0.64
CSF1P09603 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CSF1P09603 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC19.08■□□□□ 0.64
CSF1P09603 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CSF1P09603 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.07■□□□□ 0.64
CSF1P09603 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
CSF1P09603 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CSF1P09603 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
CSF1P09603 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CSF1P09603 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CSF1P09603 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CSF1P09603 AC131212.1-201ENST00000613771 668 ntBASIC19.07■□□□□ 0.64
CSF1P09603 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CSF1P09603 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CSF1P09603 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CSF1P09603 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
CSF1P09603 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.06■□□□□ 0.64
CSF1P09603 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.06■□□□□ 0.64
CSF1P09603 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CSF1P09603 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CSF1P09603 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CSF1P09603 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CSF1P09603 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC19.06■□□□□ 0.64
CSF1P09603 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.06■□□□□ 0.64
CSF1P09603 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19.06■□□□□ 0.64
CSF1P09603 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CSF1P09603 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CSF1P09603 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CSF1P09603 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
CSF1P09603 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.05■□□□□ 0.64
CSF1P09603 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CSF1P09603 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CSF1P09603 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CSF1P09603 AL592295.1-201ENST00000400984 884 ntBASIC19.05■□□□□ 0.64
CSF1P09603 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC19.05■□□□□ 0.64
CSF1P09603 HES6-204ENST00000409182 863 ntTSL 2 BASIC19.05■□□□□ 0.64
CSF1P09603 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC19.05■□□□□ 0.64
CSF1P09603 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CSF1P09603 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CSF1P09603 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CSF1P09603 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
CSF1P09603 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.05■□□□□ 0.64
CSF1P09603 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.05■□□□□ 0.64
CSF1P09603 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CSF1P09603 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC19.05■□□□□ 0.64
CSF1P09603 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CSF1P09603 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CSF1P09603 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CSF1P09603 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CSF1P09603 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CSF1P09603 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CSF1P09603 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CSF1P09603 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC19.04■□□□□ 0.64
CSF1P09603 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
CSF1P09603 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CSF1P09603 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CSF1P09603 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC19.04■□□□□ 0.64
CSF1P09603 ALDH1A3-203ENST00000557963 1670 ntBASIC19.04■□□□□ 0.64
CSF1P09603 EI24-204ENST00000527235 1625 ntTSL 5 BASIC19.03■□□□□ 0.64
CSF1P09603 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.03■□□□□ 0.64
CSF1P09603 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
CSF1P09603 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CSF1P09603 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CSF1P09603 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CSF1P09603 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CSF1P09603 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CSF1P09603 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
CSF1P09603 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CSF1P09603 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.03■□□□□ 0.64
CSF1P09603 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CSF1P09603 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
CSF1P09603 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CSF1P09603 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CSF1P09603 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CSF1P09603 FBXW4P1-201ENST00000426721 2239 ntBASIC19.02■□□□□ 0.64
CSF1P09603 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CSF1P09603 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CSF1P09603 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CSF1P09603 AC103834.1-201ENST00000520383 144 ntBASIC19.02■□□□□ 0.64
CSF1P09603 SSSCA1-AS1-201ENST00000567594 614 ntBASIC19.02■□□□□ 0.64
CSF1P09603 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.02■□□□□ 0.64
CSF1P09603 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.63
CSF1P09603 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
CSF1P09603 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CSF1P09603 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CSF1P09603 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CSF1P09603 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CSF1P09603 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CSF1P09603 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
CSF1P09603 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CSF1P09603 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CSF1P09603 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CSF1P09603 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC19.01■□□□□ 0.63
CSF1P09603 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC19.01■□□□□ 0.63
CSF1P09603 MIR4508-201ENST00000584178 70 ntBASIC19.01■□□□□ 0.63
CSF1P09603 SLC25A24-204ENST00000569674 2357 ntBASIC19.01■□□□□ 0.63
CSF1P09603 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.01■□□□□ 0.63
CSF1P09603 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CSF1P09603 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CSF1P09603 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms