Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SFTPBP07988 USF2-207ENST00000595068 1612 ntTSL 5 BASIC19.12■□□□□ 0.65
SFTPBP07988 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC19.12■□□□□ 0.65
SFTPBP07988 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SFTPBP07988 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SFTPBP07988 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC19.12■□□□□ 0.65
SFTPBP07988 SENP5-202ENST00000419026 973 ntTSL 3 BASIC19.12■□□□□ 0.65
SFTPBP07988 KRT16P3-201ENST00000439127 1283 ntBASIC19.12■□□□□ 0.65
SFTPBP07988 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC19.12■□□□□ 0.65
SFTPBP07988 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
SFTPBP07988 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC19.12■□□□□ 0.65
SFTPBP07988 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SFTPBP07988 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SFTPBP07988 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
SFTPBP07988 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SFTPBP07988 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC19.11■□□□□ 0.65
SFTPBP07988 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SFTPBP07988 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC19.11■□□□□ 0.65
SFTPBP07988 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SFTPBP07988 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
SFTPBP07988 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SFTPBP07988 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SFTPBP07988 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC19.11■□□□□ 0.65
SFTPBP07988 EP400NL-214ENST00000641289 2402 ntBASIC19.11■□□□□ 0.65
SFTPBP07988 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC19.11■□□□□ 0.65
SFTPBP07988 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SFTPBP07988 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
SFTPBP07988 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SFTPBP07988 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SFTPBP07988 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SFTPBP07988 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC19.11■□□□□ 0.65
SFTPBP07988 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SFTPBP07988 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC19.11■□□□□ 0.65
SFTPBP07988 LSM7-203ENST00000585409 512 ntTSL 2 BASIC19.11■□□□□ 0.65
SFTPBP07988 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.11■□□□□ 0.65
SFTPBP07988 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SFTPBP07988 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SFTPBP07988 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SFTPBP07988 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC19.1■□□□□ 0.65
SFTPBP07988 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SFTPBP07988 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SFTPBP07988 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC19.1■□□□□ 0.65
SFTPBP07988 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
SFTPBP07988 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC19.1■□□□□ 0.65
SFTPBP07988 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC19.1■□□□□ 0.65
SFTPBP07988 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC19.1■□□□□ 0.65
SFTPBP07988 SNX5-217ENST00000606557 1087 ntBASIC19.1■□□□□ 0.65
SFTPBP07988 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC19.1■□□□□ 0.65
SFTPBP07988 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SFTPBP07988 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.1■□□□□ 0.65
SFTPBP07988 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SFTPBP07988 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SFTPBP07988 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
SFTPBP07988 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SFTPBP07988 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
SFTPBP07988 LINC00565-201ENST00000562710 2331 ntBASIC19.09■□□□□ 0.65
SFTPBP07988 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SFTPBP07988 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC19.09■□□□□ 0.65
SFTPBP07988 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC19.09■□□□□ 0.65
SFTPBP07988 TK2-202ENST00000417693 1046 ntTSL 2 BASIC19.09■□□□□ 0.65
SFTPBP07988 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SFTPBP07988 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC19.09■□□□□ 0.65
SFTPBP07988 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
SFTPBP07988 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC19.09■□□□□ 0.65
SFTPBP07988 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
SFTPBP07988 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SFTPBP07988 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC19.09■□□□□ 0.65
SFTPBP07988 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SFTPBP07988 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
SFTPBP07988 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
SFTPBP07988 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SFTPBP07988 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC19.08■□□□□ 0.64
SFTPBP07988 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SFTPBP07988 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
SFTPBP07988 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SFTPBP07988 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
SFTPBP07988 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC19.08■□□□□ 0.64
SFTPBP07988 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
SFTPBP07988 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
SFTPBP07988 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SFTPBP07988 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SFTPBP07988 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
SFTPBP07988 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19.07■□□□□ 0.64
SFTPBP07988 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SFTPBP07988 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC19.07■□□□□ 0.64
SFTPBP07988 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SFTPBP07988 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC19.07■□□□□ 0.64
SFTPBP07988 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC19.07■□□□□ 0.64
SFTPBP07988 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
SFTPBP07988 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SFTPBP07988 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SFTPBP07988 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SFTPBP07988 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.06■□□□□ 0.64
SFTPBP07988 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SFTPBP07988 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SFTPBP07988 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
SFTPBP07988 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC19.06■□□□□ 0.64
SFTPBP07988 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
SFTPBP07988 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SFTPBP07988 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms